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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 91
First Previous 1-91 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_11052_m15f 2012 5' Callus 441bp Contig5820       unknown[Medicagotruncatula] 286 2.07106e-75
whcs_11052_m15r 2012 3' Callus 631bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 297 1.67868e-78
whdl_14053_i22r 2012 3' Crown of seedling 364bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 145 4.38309e-33
whe_18094_l24r 2012 3' Seed DPA10 375bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 151 8.16534e-35
whh_6052_f22f 2012 5' Spike at heading date 418bp Contig5820       unknown[Medicagotruncatula] 270 1.21137e-70
whh_17039_j09r 2012 3' Spike at heading date 204bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 69 3.0921e-10
whhg_4048_b12r 2012 3' Anther at meiosis of MT4B CS wheat 650bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 312 5.42e-83
whhg_16046_d11r 2012 3' Anther at meiosis of MT4B CS wheat 576bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 264 1.22371e-68
whhg_16072_j20r 2012 3' Anther at meiosis of MT4B CS wheat 652bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 307 1.33499e-81
whkp_1042_g11r 2012 3' Shoot grown under continuous light 205bp Contig5820       unnamedproteinproduct[BurkholderiaglumaeBGR1] 37 2.21378
whkv_19071_i17r 2012 3' Shoot grown with continuous light after cold treatment 449bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 185 3.88173e-45
whms_2062_d16r 2012 3' Seed DPA5 of DT3DL CS wheat 581bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 267 1.49537e-69
whms_18089_h21f 2012 5' Seed DPA5 of DT3DL CS wheat 661bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 426 3.52962e-117
whms_18089_h21r 2012 3' Seed DPA5 of DT3DL CS wheat 644bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 309 4.47501e-82
whms_13087_i22r 2012 3' Seed DPA5 of DT3DL CS wheat 566bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 261 1.00498e-67
whoh_4005_f07r 2012 3' Pistil at heading date 495bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 215 4.52958e-54
whr_20035_b15r 2012 3' Root 329bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 118 5.80406e-25
whr_12061_k04r 2012 3' Root 379bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 155 4.31251e-36
whrd_2035_m10r 2012 3' Root of dessiccated seed 379bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 136 2.07303e-30
whrd_7001_o02f 2012 5' Root of dessiccated seed 384bp Contig5820       unknown[Medicagotruncatula] 251 7.48212e-65
whrd_7001_o02r 2012 3' Root of dessiccated seed 583bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 271 7.92915e-71
whrd_4018_p08r 2012 3' Root of dessiccated seed 447bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 183 1.93483e-44
whrd_1034_p11f 2012 5' Root of dessiccated seed 386bp Contig5820       unknown[Medicagotruncatula] 252 2.56128e-65
whrd_1034_p11r 2012 3' Root of dessiccated seed 565bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 260 1.28911e-67
whsc_19062_c15f 2012 5' Shoot grown with cold treatment 218bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 103 2.48211e-20
whsc_19062_c15r 2012 3' Shoot grown with cold treatment 313bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 123 1.77416e-26
whsd_7031_a06r 2012 3' Shoot grown with dessication 621bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 309 5.42664e-82
whsh_16084_f18f 2012 5' - 223bp Contig5820       PREDICTED:Zimp10-likeprotein[Saccoglossuskowalevskii] 36 5.0236
whsh_16084_f18r 2012 3' - 214bp Contig5820       ubiquitinfamilyprotein[Trichinellaspiralis] 47 0.00162174
whsh_15060_h22f 2012 5' - 114bp Contig5820            
whsh_15060_h22r 2012 3' - 97bp Contig5820            
whsl_2077_k11r 2012 3' Seed DPA30 499bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 197 9.72871e-49
whsl_24094_l24r 2012 3' Seed DPA30 417bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 210 1.94298e-52
whv_1618035_n09f 2012 5' Shoot grown under cold condition for 16days 361bp Contig5820       unknown[Medicagotruncatula] 238 6.51464e-61
whv_1618035_n09r 2012 3' Shoot grown under cold condition for 16days 570bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 263 2.63214e-68
whv3_1010_h04r 2012 3' Shoot grown under cold condition for 3days 569bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 259 4.96401e-67
whva_9050_b10f 2012 5' Shoot with ABA treatment 597bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 268 9.45201e-70
whva_9050_b10r 2012 3' Shoot with ABA treatment 627bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 269 6.30855e-70
whva_9027_g08r 2012 3' Shoot with ABA treatment 247bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 58 9.23001e-07
whvd_17048_b12r 2012 3' Shoot grown with dessication 406bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 158 8.66086e-37
whvd_16053_k14f 2012 5' Shoot grown with dessication 666bp Contig5820       polyubiquitin,partial[Wolffiaaustraliana] 424 1.35703e-116
whvd_16053_k14r 2012 3' Shoot grown with dessication 422bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 192 4.17502e-47
whvd_16005_l01r 2012 3' Shoot grown with dessication 322bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 116 2.22213e-24
whvh_19062_c16r 2012 3' Shoot with heat shock treatment 593bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 272 6.47588e-71
whvh_8027_e05r 2012 3' Shoot with heat shock treatment 489bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 212 5.07732e-53
whvs_18045_d10r 2012 3' Liquid cultured tissue 159bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 58 9.36164e-07
whxa_29071_i18f 2012 5' Root 460bp Contig5820       unknown[Medicagotruncatula] 299 2.36717e-79
whxa_29071_i18r 2012 3' Root 542bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 247 1.01089e-63
whxa_27087_i22r 2012 3' Root 294bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 81 1.35301e-13
whxc_17049_o13r 2012 3' Root, treated at 50 microM Al for 6h 409bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 157 1.1265e-36
whxe_24056_j15r 2012 3' Seedling, infected with leaf rust 339bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 135 7.73793e-30
whxe_30019_m05r 2012 3' Seedling, infected with leaf rust 86bp Contig5820            
whxe_1036_m12r 2012 3' Seedling, infected with leaf rust 500bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 267 7.65507e-70
whxf_16028_e07f 2012 5' Seedling, infected with leaf rust 653bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 299 4.80677e-79
whxf_17028_e07f 2012 5' Seedling, infected with leaf rust 660bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 299 4.98263e-79
whxf_18028_e07f 2012 5' Seedling, infected with leaf rust 529bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 295 5.07053e-78
whxf_16028_e07r 2012 3' Seedling, infected with leaf rust 563bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 255 4.14691e-66
whxf_17028_e07r 2012 3' Seedling, infected with leaf rust 604bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 281 1.43082e-73
whxf_18028_e07r 2012 3' Seedling, infected with leaf rust 590bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 274 9.83475e-72
whxf_9036_m12f 2012 5' Seedling, infected with leaf rust 334bp Contig5820       unknown[Medicagotruncatula] 208 4.23255e-52
whxf_8036_m12r 2012 3' Seedling, infected with leaf rust 496bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 215 3.48417e-54
whxf_9036_m12r 2012 3' Seedling, infected with leaf rust 86bp Contig5820       unknown[Lotusjaponicus] 59 4.17341e-07
whxg_21025_h06r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 371bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 146 2.01915e-33
whxg_13004_n03r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 449bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 185 3.88173e-45
HX009097 whxi_2034_o11r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 313bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 98 1.04639e-18
HX009098 whxi_3034_o11r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 129bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 56 3.53378e-06
HX027651 whxk_6085_l21r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 314bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 99 2.74349e-19
HX036617 whxl_10021_k05r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 313bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 98 1.04639e-18
HX047033 whxm_6006_l03r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 326bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 113 2.44768e-23
HX050417 whxn_38032_a07f 2012 5' Leaves, plant was grown at constant 23Ž 48bp Contig5820            
HX050445 whxn_37032_a07r 2012 3' Leaves, plant was grown at constant 23Ž 321bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 104 1.49609e-20
HX050740 whxn_31048_a12r 2012 3' Leaves, plant was grown at constant 23Ž 721bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 359 4.82178e-97
HX061327 whxn_31023_i06r 2012 3' Leaves, plant was grown at constant 23Ž 618bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 294 1.75701e-77
HX063469 whxn_12072_j20r 2012 3' Leaves, plant was grown at constant 23Ž 499bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 217 1.192e-54
HX068782 whxn_12067_n18f 2012 5' Leaves, plant was grown at constant 23Ž 621bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 388 6.94186e-106
HX068804 whxn_12067_n18r 2012 3' Leaves, plant was grown at constant 23Ž 603bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 284 9.90877e-75
HX079445 whxo_18039_j10r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 559bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 255 5.21908e-66
HX093650 whxp_32041_g10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 588bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 379 2.83505e-103
HX093681 whxp_32041_g10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 564bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 261 1.00498e-67
HX103342 whxp_10036_n11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 724bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 358 1.41668e-96
HX103343 whxp_11036_n11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 662bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 382 5.84499e-104
HX127618 whxr_11061_c13r 2012 3' Roots, 18 day old plants were grown hydroponically 638bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 306 4.82245e-81
HX148510 whxs_5011_e02r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 711bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 428 6.37556e-118
HX178356 whxt_3035_m09r 2012 3' Roots, 18 day old plants were grown hydroponically 74bp Contig5820       unknown[Lotusjaponicus] 52 4.94081e-05
HX182980 whxu_29016_a04r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 775bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 393 3.49829e-107
whxv_2063_a13r 2012 3' Leaves, plant was grown at constant 23Ž 786bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 399 5.04554e-109
whxw_3079_b18r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 794bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 403 4.67481e-110
whyd_12010_d01r 2012 3' Spikelet at late flowering 423bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 141 6.47107e-32
whyd_6044_g03f 2012 5' Spikelet at late flowering 578bp Contig5820       polyubiquitin,partial[Wolffiaaustraliana] 374 1.11549e-101
whyd_6043_g03r 2012 3' Spikelet at late flowering 449bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 197 9.87119e-49
whyd_21078_k23r 2012 3' Spikelet at late flowering 452bp Contig5820       PREDICTED:polyubiquitin-like[Brachypodiumdistachyon] 184 1.12452e-44
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