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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 47
First Previous 1-47 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsd_12062_c15f 2012 5' Shoot grown with dessication 673bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 329 6.05017e-88
whsd_12062_c15r 2012 3' Shoot grown with dessication 525bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 193 1.5202e-47
whsd_10091_e21f 2012 5' Shoot grown with dessication 590bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 220 2.20114e-55
whsd_10091_e21r 2012 3' Shoot grown with dessication 543bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 240 1.60629e-61
whv3_9017_p06f 2012 5' Shoot grown under cold condition for 3days 420bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 260 1.24835e-67
whv3_9017_p06r 2012 3' Shoot grown under cold condition for 3days 228bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 154 9.65858e-36
whvd_16058_g16r 2012 3' Shoot grown with dessication 59bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 40 0.200888
whxe_11079_b18f 2012 5' Seedling, infected with leaf rust 614bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 337 1.78432e-90
whxe_12079_b18f 2012 5' Seedling, infected with leaf rust 414bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 247 1.40025e-63
whxe_11079_b18r 2012 3' Seedling, infected with leaf rust 550bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 192 6.81918e-47
whxe_12079_b18r 2012 3' Seedling, infected with leaf rust 62bp Contig20802            
whxe_38006_k03f 2012 5' Seedling, infected with leaf rust 498bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 297 6.93968e-79
whxe_38006_k03r 2012 3' Seedling, infected with leaf rust 484bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 153 2.8117e-35
whxe_23066_o20f 2012 5' Seedling, infected with leaf rust 539bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 306 2.34606e-81
whxe_23066_o20r 2012 3' Seedling, infected with leaf rust 523bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 193 1.5202e-47
whxf_3030_d07f 2012 5' Seedling, infected with leaf rust 589bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 320 2.00878e-85
whxf_4030_d07f 2012 5' Seedling, infected with leaf rust 666bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 320 2.75982e-85
whxf_3030_d07r 2012 3' Seedling, infected with leaf rust 530bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 192 4.62884e-47
whxf_4030_d07r 2012 3' Seedling, infected with leaf rust 532bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 185 4.42874e-45
whxg_20047_a10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 540bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 333 2.38939e-89
whxg_21047_a10f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 584bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 342 3.71866e-92
whxg_20047_a10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 640bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 272 5.90873e-71
whxg_21047_a10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 259bp Contig20802            
whxg_6013_d02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 598bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 338 7.43735e-91
whxg_6013_d02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 290bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 54 1.36105e-05
whxg_6061_d13f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 600bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 342 3.94362e-92
whxg_6061_d13r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 129bp Contig20802            
HX006336 whxi_4005_k02f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 434bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 264 8.5003e-69
HX006348 whxi_4005_k02r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 497bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 190 1.56041e-46
HX019879 whxk_6015_a02f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 369bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 233 2.07931e-59
HX019893 whxk_6015_a02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 292bp Contig20802            
HX019894 whxk_7015_a02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 92bp Contig20802            
HX026696 whxk_9038_k11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 47bp Contig20802       hypotheticalproteinSORBIDRAFT_08g022930[Sorghumbicolor] 35 3.90634
HX029152 whxk_17017_o05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 329bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 189 2.6774e-46
HX029153 whxk_18017_o05f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 346bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 210 1.937e-52
HX029159 whxk_17017_o05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 268bp Contig20802            
HX029160 whxk_18017_o05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 248bp Contig20802            
HX045429 whxm_8040_i12f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 429bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 262 3.24387e-68
HX045441 whxm_8040_i12r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 378bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 153 2.79529e-35
HX118815 whxq_4070_k19f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 546bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 316 3.00832e-84
HX123141 whxq_18050_o16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 117bp Contig20802            
HX123165 whxq_18050_o16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 105bp Contig20802            
whxv_2017_o05f 2012 5' Leaves, plant was grown at constant 23Ž 781bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 306 5.76589e-81
whxv_2017_o05r 2012 3' Leaves, plant was grown at constant 23Ž 728bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 303 3.23227e-80
whxx_3049_p13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 760bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 342 6.93676e-92
whxx_3049_p13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 729bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 301 1.23996e-79
whxy_3012_e03r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 762bp Contig20802       PREDICTED:uncharacterizedproteinywkD-like[Brachypodiumdistachyon] 343 3.11377e-92
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