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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 88
First Previous 1-88 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_2042_h11f 2012 5' Callus 640bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 7.2397e-61
whcs_2042_h11r 2012 3' Callus 560bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 5.15047e-61
whcs_16067_n17f 2012 5' Callus 500bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 3.80799e-61
whcs_16067_n17r 2012 3' Callus 483bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 3.7963e-61
whdp_8090_h23r 2012 3' Seed DPA20 459bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 195 4.83536e-48
whdp_18083_m22f 2012 5' Seed DPA20 579bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 5.60068e-61
whe_12007_m07f 2012 5' Seed DPA10 533bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 237 9.82055e-61
whe_12008_m07r 2012 3' Seed DPA10 476bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 234 9.43529e-60
whe_7008_n01f 2012 5' Seed DPA10 550bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 4.86434e-61
whe_8008_n01f 2012 5' Seed DPA10 399bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 237 1.47309e-60
whe_7008_n01r 2012 3' Seed DPA10 427bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 161 6.01741e-38
whe_8008_n01r 2012 3' Seed DPA10 434bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 171 7.49862e-41
whe_16016_p01f 2012 5' Seed DPA10 497bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 177 1.36699e-42
whe_16016_p01r 2012 3' Seed DPA10 189bp Contig9282            
whe_16016_p07r 2012 3' Seed DPA10 438bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 163 1.55024e-38
whei_17051_m13f 2012 5' Dormant seed with water absorption after breaking 483bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 3.7963e-61
whei_17051_m13r 2012 3' Dormant seed with water absorption after breaking 530bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 161 6.69956e-38
whei_3083_n21f 2012 5' Dormant seed with water absorption after breaking 334bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 188 7.73143e-46
whei_3083_n21r 2012 3' Dormant seed with water absorption after breaking 540bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 209 3.05076e-52
whem_7012_e04f 2012 5' Dormant seed with water absorption 433bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 3.82448e-61
whem_7012_e04r 2012 3' Dormant seed with water absorption 570bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 236 3.5072e-60
whem_3089_g21f 2012 5' Dormant seed with water absorption 462bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 3.79682e-61
whem_6019_n06f 2012 5' Dormant seed with water absorption 567bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 5.3159e-61
whem_6019_n06r 2012 3' Dormant seed with water absorption 555bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 221 8.19417e-56
whf_22030_l02f 2012 5' Spike at flowering date 531bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 4.31242e-61
whf_22031_l02r 2012 3' Spike at flowering date 257bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 81 1.04238e-13
whf_3071_m23f 2012 5' Spike at flowering date 287bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 98 6.3157e-19
whf_4071_m23f 2012 5' Spike at flowering date 511bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 237 1.46351e-60
whf_3071_m23r 2012 3' Spike at flowering date 404bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 145 4.44808e-33
whh_17074_d05f 2012 5' Spike at heading date 521bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 237 1.52947e-60
whh_17075_d05r 2012 3' Spike at heading date 333bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 87 1.42752e-15
whh_4058_d16f 2012 5' Spike at heading date 500bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 3.80799e-61
whh_4058_d16r 2012 3' Spike at heading date 487bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 161 6.02554e-38
whkv_10059_e13f 2012 5' Shoot grown with continuous light after cold treatment 684bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 8.51485e-61
whkv_10059_e13r 2012 3' Shoot grown with continuous light after cold treatment 657bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 7.80384e-61
whms_20078_d19f 2012 5' Seed DPA5 of DT3DL CS wheat 547bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 200 1.87969e-49
whms_20078_d19r 2012 3' Seed DPA5 of DT3DL CS wheat 530bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 225 3.77786e-57
whoh_17071_j11f 2012 5' Pistil at heading date 371bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 158 5.13467e-37
whoh_17071_j11r 2012 3' Pistil at heading date 55bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 43 0.0172132
whr_7036_f15r 2012 3' Root 468bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 151 8.15149e-35
whsc_5031_a05f 2012 5' Shoot grown with cold treatment 607bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 200 2.53213e-49
whsc_5031_a05r 2012 3' Shoot grown with cold treatment 514bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 175 4.10416e-42
whvs_12044_e12r 2012 3' Liquid cultured tissue 221bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 151 1.07508e-34
whxa_5003_m02f 2012 5' Root 383bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 229 3.97657e-58
whxa_5003_m02r 2012 3' Root 574bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 5.50575e-61
whxa_20049_o14f 2012 5' Root 635bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 7.14568e-61
whxa_20049_o14r 2012 3' Root 611bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 238 1.11193e-60
whxa_20001_p01f 2012 5' Root 571bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 235 5.98237e-60
whxa_20001_p01r 2012 3' Root 312bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 104 8.56001e-21
whxb_19075_f18f 2012 5' Root 422bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 195 4.9318e-48
whxb_19075_f18r 2012 3' Root 597bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 229 6.35477e-58
whxb_20042_h12f 2012 5' Root 519bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 4.04392e-61
whxb_25042_h12f 2012 5' Root 494bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 135 4.58224e-30
whxb_20042_h12r 2012 3' Root 602bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 6.23531e-61
whxb_25042_h12r 2012 3' Root 499bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 163 1.55682e-38
whxb_1051_m14f 2012 5' Root 301bp Contig9282       majorfacilitatorsuperfamilyMFS_1[ComamonastestosteroniATCC11996] 36 2.90512
whxb_1051_m14r 2012 3' Root 280bp Contig9282            
whxd_18062_c16f 2012 5' Root, treated at 50 microM Al for 6h 519bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 4.04392e-61
whxd_33044_e12f 2012 5' Root, treated at 50 microM Al for 6h 454bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 135 4.58671e-30
whxd_34044_e12f 2012 5' Root, treated at 50 microM Al for 6h 483bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 146 1.96333e-33
whxd_33044_e12r 2012 3' Root, treated at 50 microM Al for 6h 429bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 163 1.57687e-38
whxd_34044_e12r 2012 3' Root, treated at 50 microM Al for 6h 429bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 163 1.57687e-38
whxd_28055_j14f 2012 5' Root, treated at 50 microM Al for 6h 329bp Contig9282       majorfacilitatorsuperfamilyMFS_1[ComamonastestosteroniATCC11996] 36 2.90064
whxd_28055_j14r 2012 3' Root, treated at 50 microM Al for 6h 285bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 37 1.67219
whxd_14082_o24f 2012 5' Root, treated at 50 microM Al for 6h 519bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 4.04392e-61
whxd_14082_o24r 2012 3' Root, treated at 50 microM Al for 6h 543bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 194 1.01079e-47
whxf_9045_d09r 2012 3' Seedling, infected with leaf rust 565bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 227 1.57948e-57
whxg_7029_c06f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 624bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 6.89664e-61
whxg_7029_c06r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 610bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 219 4.03325e-55
whxh_26069_l18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 635bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 7.14568e-61
whxh_26069_l18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 566bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 227 1.6082e-57
HX051061 whxn_10079_a18f 2012 5' Leaves, plant was grown at constant 23℃ 512bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 169 2.8695e-40
HX051090 whxn_10079_a18r 2012 3' Leaves, plant was grown at constant 23℃ 476bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 169 2.85409e-40
HX081855 whxo_17035_m10f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 622bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 6.80216e-61
HX081856 whxo_18035_m10f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 641bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 7.33372e-61
HX081870 whxo_17035_m10r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 563bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 209 3.40816e-52
HX081871 whxo_18035_m10r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 591bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 220 2.92041e-55
HX143131 whxr_26034_p12f 2012 5' Roots, 18 day old plants were grown hydroponically 78bp Contig9282            
HX143151 whxr_26034_p12r 2012 3' Roots, 18 day old plants were grown hydroponically 65bp Contig9282            
HX173242 whxt_17023_i06f 2012 5' Roots, 18 day old plants were grown hydroponically 686bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 8.60842e-61
HX173269 whxt_17023_i06r 2012 3' Roots, 18 day old plants were grown hydroponically 669bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 8.14057e-61
HX173984 whxt_4072_i20f 2012 5' Roots, 18 day old plants were grown hydroponically 661bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 234 1.48947e-59
HX174012 whxt_4072_i20r 2012 3' Roots, 18 day old plants were grown hydroponically 650bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 239 7.61579e-61
whxv_2031_b06f 2012 5' Leaves, plant was grown at constant 23℃ 558bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 200 1.99247e-49
whxv_2031_b06r 2012 3' Leaves, plant was grown at constant 23℃ 521bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 221 6.64976e-56
whxw_2036_n11f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 651bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 234 1.45401e-59
whxw_2036_n11r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 636bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 230 1.94595e-58
whyd_25039_m21r 2012 3' Spikelet at late flowering 470bp Contig9282       PREDICTED:nucleartransportfactor2-likeisoform1[Brachypodiumdistachyon] 224 7.54312e-57
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