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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 37
First Previous 1-37 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_11084_m23f 2012 5' Callus 683bp Contig11085       predictedprotein[Hordeumvulgaresubsp.vulgare] 444 1.33443e-122
whcs_11084_m23r 2012 3' Callus 778bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 416 5.12452e-114
whdl_21054_j10r 2012 3' Crown of seedling 97bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 64 9.8165e-09
whe_13012_g07f 2012 5' Seed DPA10 523bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 303 1.36227e-80
whe_13011_g07r 2012 3' Seed DPA10 346bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 188 4.62109e-46
whe_14011_g07r 2012 3' Seed DPA10 346bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 188 4.62109e-46
whh_23019_b20f 2012 5' Spike at heading date 525bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 266 3.22105e-69
whh_23019_b20r 2012 3' Spike at heading date 580bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 286 3.99514e-75
whok_20022_l08f 2012 5' Seed DPA5 682bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 340 2.68402e-91
whok_20022_l08r 2012 3' Seed DPA5 656bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 359 5.17417e-97
whsc_12004_n03r 2012 3' Shoot grown with cold treatment 597bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 353 1.71881e-95
whsd_19073_g17f 2012 5' Shoot grown with dessication 514bp Contig11085       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 1.70839e-72
whsd_19073_g17r 2012 3' Shoot grown with dessication 472bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 224 1.28094e-56
whva_7028_h08r 2012 3' Shoot with ABA treatment 517bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 224 1.31415e-56
whvd_14031_a05f 2012 5' Shoot grown with dessication 718bp Contig11085       predictedprotein[Hordeumvulgaresubsp.vulgare] 440 2.80719e-121
whvd_14031_a05r 2012 3' Shoot grown with dessication 704bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 358 1.35445e-96
whvd_6071_i18f 2012 5' Shoot grown with dessication 691bp Contig11085       predictedprotein[Hordeumvulgaresubsp.vulgare] 451 8.54202e-125
whvd_6071_i18r 2012 3' Shoot grown with dessication 743bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 401 9.1363e-110
whvs_5077_d18r 2012 3' Liquid cultured tissue 769bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 423 3.13021e-116
whxd_35084_m24f 2012 5' Root, treated at 50 microM Al for 6h 516bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 338 6.24431e-91
whxd_35084_m24r 2012 3' Root, treated at 50 microM Al for 6h 577bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 299 4.56044e-79
whxd_10049_p13f 2012 5' Root, treated at 50 microM Al for 6h 322bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 96 3.10793e-18
whxd_10049_p13r 2012 3' Root, treated at 50 microM Al for 6h 304bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 119 3.39552e-25
whxe_1075_f18f 2012 5' Seedling, infected with leaf rust 593bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 354 9.92158e-96
whxe_1075_f18r 2012 3' Seedling, infected with leaf rust 425bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 227 1.52314e-57
whxg_39015_a02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 573bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 299 2.58295e-79
whxg_39015_a02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 595bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 299 4.94692e-79
whxh_1069_k17f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 609bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 339 2.67416e-91
whxh_1069_k17r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 572bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 346 1.8425e-93
whxh_12050_p16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 385bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 176 3.05891e-42
whxh_12050_p16r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 368bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 206 2.08413e-51
HX042056 whxm_8013_d01f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 443bp Contig11085       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 2.9702e-77
HX042067 whxm_8013_d01r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 496bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 299 3.11508e-79
HX169742 whxt_10043_f10f 2012 5' Roots, 18 day old plants were grown hydroponically 669bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 437 2.04665e-120
HX169768 whxt_10043_f10r 2012 3' Roots, 18 day old plants were grown hydroponically 728bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 373 3.32168e-101
HX175410 whxt_15088_j24f 2012 5' Roots, 18 day old plants were grown hydroponically 712bp Contig11085       predictedprotein[Hordeumvulgaresubsp.vulgare] 465 4.70633e-129
HX175433 whxt_15088_j24r 2012 3' Roots, 18 day old plants were grown hydroponically 729bp Contig11085       PREDICTED:26Sproteaseregulatorysubunit8homologA-like[Brachypodiumdistachyon] 373 3.32168e-101
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