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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 45
First Previous 1-45 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_20004_f13f 2012 5' Crown of seedling 210bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 102 5.58507e-20
whdl_2011_g07f 2012 5' Crown of seedling 341bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 202 3.93151e-50
whdl_2011_g13f 2012 5' Crown of seedling 360bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 168 8.27936e-40
whdp_14012_f03r 2012 3' Seed DPA20 287bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 180 1.26375e-43
whem_17070_k20f 2012 5' Dormant seed with water absorption 354bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 225 5.77402e-57
whhg_8046_d11r 2012 3' Anther at meiosis of MT4B CS wheat 63bp Contig6017       unknown[Lotusjaponicus] 46 0.00225926
whhg_14052_n15f 2012 5' Anther at meiosis of MT4B CS wheat 607bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 353 3.00765e-95
whkp_15016_b03f 2012 5' Shoot grown under continuous light 643bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 255 5.87172e-66
whkp_15016_b03r 2012 3' Shoot grown under continuous light 610bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 267 1.29145e-69
whkp_10087_j22f 2012 5' Shoot grown under continuous light 629bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 285 8.62145e-75
whkp_10087_j22r 2012 3' Shoot grown under continuous light 603bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 304 1.20846e-80
whrd_15062_c15f 2012 5' Root of dessiccated seed 205bp Contig6017            
whsc_10064_a15f 2012 5' Shoot grown with cold treatment 562bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 334 6.89679e-90
whsd_7074_h20f 2012 5' Shoot grown with dessication 74bp Contig6017       hypotheticalprotein,partial[Nicotianabenthamiana] 51 8.42775e-05
whsl_14006_i19f 2012 5' Seed DPA30 429bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 222 2.84836e-56
whsl_14078_k17f 2012 5' Seed DPA30 525bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 291 5.35697e-77
whsp_8063_a14f 2012 5' 614bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 354 8.26928e-96
whsp_11089_h22f 2012 5' 540bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 318 7.95419e-85
whv_1616076_f19r 2012 3' Shoot grown under cold condition for 16days 531bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 217 1.75488e-54
whvh_18081_o21f 2012 5' Shoot with heat shock treatment 678bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 358 7.29234e-97
whvh_18081_o21r 2012 3' Shoot with heat shock treatment 675bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 315 9.04079e-84
whvs_19032_a07f 2012 5' Liquid cultured tissue 784bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 358 9.86984e-97
whvs_19032_a07r 2012 3' Liquid cultured tissue 746bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 329 7.59457e-88
whvs_8034_p11f 2012 5' Liquid cultured tissue 719bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 358 8.2247e-97
whvs_8034_p11r 2012 3' Liquid cultured tissue 433bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 170 2.18177e-40
whxa_13055_i14f 2012 5' Root 403bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 228 6.81483e-58
whxa_14017_o05f 2012 5' Root 352bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 187 1.74255e-45
whxb_6075_f18f 2012 5' Root 523bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 304 5.97275e-81
whxb_6075_f18r 2012 3' Root 313bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 108 7.7422e-22
whxb_5074_h19r 2012 3' Root 387bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 89 3.7503e-16
whxb_14035_m09f 2012 5' Root 195bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 130 1.94049e-28
whxb_14035_m09r 2012 3' Root 590bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 268 7.04805e-70
whxc_28030_c07f 2012 5' Root, treated at 50 microM Al for 6h 320bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 202 4.03661e-50
whxc_25002_o04f 2012 5' Root, treated at 50 microM Al for 6h 98bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 61 8.31016e-08
whxd_17015_b01f 2012 5' Root, treated at 50 microM Al for 6h 486bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 279 2.58955e-73
whxd_17015_b01r 2012 3' Root, treated at 50 microM Al for 6h 530bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 200 1.69974e-49
whxd_29030_d07f 2012 5' Root, treated at 50 microM Al for 6h 368bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 230 1.03195e-58
whxd_29030_d07r 2012 3' Root, treated at 50 microM Al for 6h 305bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 62 4.90793e-08
whxd_4002_o04f 2012 5' Root, treated at 50 microM Al for 6h 133bp Contig6017       Os09g0485900[OryzasativaJaponicaGroup] 87 1.42699e-15
whxg_37042_g11f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 377bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 226 2.59817e-57
whxg_37042_g11r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 463bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 192 5.32265e-47
whxg_31052_m16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 376bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 226 2.59817e-57
whxg_31052_m16r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 504bp Contig6017       PREDICTED:60SribosomalproteinL9-likeisoform1[Brachypodiumdistachyon] 220 1.82202e-55
HX196829 whxu_23070_l20r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 769bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 349 4.39835e-94
whyd_29062_l16f 2012 5' Spikelet at late flowering 495bp Contig6017       PREDICTED:60SribosomalproteinL9-like[Brachypodiumdistachyon] 262 2.48537e-68
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