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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 30
First Previous 1-30 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whh_5003_e07f 2012 5' Spike at heading date 464bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 297 7.07355e-79
whh_5003_e07r 2012 3' Spike at heading date 508bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 192 3.18012e-47
whok_17031_a05f 2012 5' Seed DPA5 575bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 339 3.90925e-91
whok_17031_a05r 2012 3' Seed DPA5 434bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 198 4.38592e-49
whok_16052_m15f 2012 5' Seed DPA5 613bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 379 3.13504e-103
whv_168051_m14f 2012 5' Shoot grown under cold condition for 16days 607bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 401 7.48388e-110
whv_168051_m14r 2012 3' Shoot grown under cold condition for 16days 731bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 392 5.34125e-107
whv_167018_o08f 2012 5' Shoot grown under cold condition for 16days 624bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 324 1.24815e-86
whv_167018_o08r 2012 3' Shoot grown under cold condition for 16days 708bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 321 1.85357e-85
whxa_4003_m01f 2012 5' Root 515bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 233 1.65856e-59
whxa_4003_m02f 2012 5' Root 536bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 230 2.09223e-58
whxa_4003_m02r 2012 3' Root 588bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 268 7.04805e-70
whxa_4051_m13f 2012 5' Root 72bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 54 9.9554e-06
whxb_31050_p16f 2012 5' Root 340bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 77 1.9075e-12
whxc_25032_a07f 2012 5' Root, treated at 50 microM Al for 6h 314bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 212 3.79288e-53
whxc_25032_a07r 2012 3' Root, treated at 50 microM Al for 6h 318bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 56 4.68973e-06
whxc_27093_c22f 2012 5' Root, treated at 50 microM Al for 6h 331bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 192 5.37448e-47
whxc_27093_c22r 2012 3' Root, treated at 50 microM Al for 6h 451bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 181 7.32062e-44
whxe_33096_a23f 2012 5' Seedling, infected with leaf rust 564bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 330 1.76166e-88
whxe_33096_a23r 2012 3' Seedling, infected with leaf rust 581bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 282 5.86675e-74
whxe_38061_c14r 2012 3' Seedling, infected with leaf rust 482bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 215 4.49484e-54
whxf_19043_f09f 2012 5' Seedling, infected with leaf rust 365bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 235 3.22055e-60
whxg_6061_c14f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 586bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 365 5.44511e-99
whxg_6061_c14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 612bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 310 2.30244e-82
whxg_13030_d07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 81bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 60 2.46108e-07
HX042031 whxm_9094_c24f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 268bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 146 1.99215e-33
HX042032 whxm_10094_c24r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 384bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 157 1.12586e-36
HX042045 whxm_9094_c24r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 380bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 153 2.78419e-35
HX128561 whxr_27030_d08f 2012 5' Roots, 18 day old plants were grown hydroponically 871bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 423 3.05202e-116
HX128585 whxr_27030_d08r 2012 3' Roots, 18 day old plants were grown hydroponically 709bp Contig6663       PREDICTED:polyadenylate-bindingprotein2-like[Brachypodiumdistachyon] 321 1.85357e-85
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