National BioResource Project (NBRP)::KOMUGI -Integrated Wheat Science Database- : Genome / Development

Genome / Development

cDNA BLAST Tissue specific clones complex contig list (2012)

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cDNA

*1 Contig derived from a single library *2 Contig derived from multiple libraries

Hit Count : 9
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Clone	Registered year	Dir.	Tissue	Sequence	Contig*2	Homology (BLAST)
						Swiss-Prot			nr
						Top hit	GO ID	Term	Top hit (Definition)	score	E-Value
whsc_3091_f21f	2012	5'	Shoot grown with cold treatment	545bp	Contig17539				ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum]	335	3.6689e-90
whsc_3091_f21r	2012	3'	Shoot grown with cold treatment	501bp	Contig17539				ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Cynosuruscristatus]	340	1.21368e-91
whsc_17091_f22f	2012	5'	Shoot grown with cold treatment	71bp	Contig17539				ribulosebiphosphatecarboxylase,partial[Gastridiumventricosum]	58	6.60707e-07
whsc_1074_g19f	2012	5'	Shoot grown with cold treatment	564bp	Contig17539				ribulose-bisphosphatecarboxylase,partial[Panicumbisulcatum]	393	1.27424e-107
whsc_1074_g19r	2012	3'	Shoot grown with cold treatment	600bp	Contig17539				ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Crithopsisdelileana]	419	3.36633e-115
whsc_6089_h21f	2012	5'	Shoot grown with cold treatment	325bp	Contig17539				ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa]	220	1.85682e-55
whsc_6089_h21r	2012	3'	Shoot grown with cold treatment	303bp	Contig17539				ribulosebiphosphatecarboxylase,partial[Poaannua]	212	3.83504e-53
whsc_6056_j15f	2012	5'	Shoot grown with cold treatment	331bp	Contig17539				ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa]	224	1.27625e-56
whsc_6056_j15r	2012	3'	Shoot grown with cold treatment	303bp	Contig17539				ribulosebiphosphatecarboxylase,partial[Poaannua]	212	3.83504e-53