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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 753
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_9061_c13f 2012 5' Callus 520bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.25747e-66
whcs_9061_c13r 2012 3' Callus 481bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.77117e-66
whcs_9061_c14f 2012 5' Callus 532bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.01391e-65
whcs_9061_c14r 2012 3' Callus 441bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 3.31418e-65
whe_6078_l05f 2012 5' Seed DPA10 461bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.64694e-64
whe_6078_l05r 2012 3' Seed DPA10 485bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 3.40533e-65
whf_7034_b09r 2012 3' Spike at flowering date 439bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.72153e-66
whf_13052_f10f 2012 5' Spike at flowering date 480bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.77117e-66
whf_18093_h24f 2012 5' Spike at flowering date 499bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.79911e-66
whf_18093_h24r 2012 3' Spike at flowering date 354bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 169 2.87894e-40
whf_8045_k15f 2012 5' Spike at flowering date 556bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 2.19274e-64
whf_8045_k15r 2012 3' Spike at flowering date 471bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.88977e-66
whf_24072_m17r 2012 3' Spike at flowering date 473bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 244 9.15856e-63
whf_18032_o02f 2012 5' Spike at flowering date 563bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.20657e-65
whf_18032_o02r 2012 3' Spike at flowering date 472bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 247 1.0867e-63
whh_8076_g11f 2012 5' Spike at heading date 568bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.2285e-65
whh_8075_g11r 2012 3' Spike at heading date 471bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 3.36309e-65
whhg_7015_b02f 2012 5' Anther at meiosis of MT4B CS wheat 337bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.40573e-55
whhg_7015_b02r 2012 3' Anther at meiosis of MT4B CS wheat 534bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.01391e-65
whhg_16027_e05f 2012 5' Anther at meiosis of MT4B CS wheat 574bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.24451e-65
whhg_16027_e05r 2012 3' Anther at meiosis of MT4B CS wheat 529bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.69831e-66
whkp_8087_j22f 2012 5' Shoot grown under continuous light 170bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 97 1.37925e-18
whkp_8087_j22r 2012 3' Shoot grown under continuous light 510bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 5.58747e-60
whkp_4053_k14f 2012 5' Shoot grown under continuous light 719bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 249 7.02752e-64
whkp_4053_k14r 2012 3' Shoot grown under continuous light 640bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 1.05899e-59
whkp_18034_o11f 2012 5' Shoot grown under continuous light 625bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.58625e-65
whkp_18034_o11r 2012 3' Shoot grown under continuous light 396bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 9.62629e-60
whkp_3082_o24f 2012 5' Shoot grown under continuous light 533bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.01391e-65
whkp_3082_o24r 2012 3' Shoot grown under continuous light 490bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.92083e-66
whkp_19017_p05f 2012 5' Shoot grown under continuous light 44bp Contig18019       PREDICTED:photosystemII10kDapolypeptide,chloroplastic-likeisoform1[Brachypodiumdistachyon] 36 2.79158
whkv_20032_b08f 2012 5' Shoot grown with continuous light after cold treatment 686bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.97997e-65
whkv_16032_b08r 2012 3' Shoot grown with continuous light after cold treatment 481bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.73163e-66
whkv_20032_b08r 2012 3' Shoot grown with continuous light after cold treatment 668bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.88141e-65
whkv_3025_g06r 2012 3' Shoot grown with continuous light after cold treatment 486bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.96141e-66
whkv_4024_i08r 2012 3' Shoot grown with continuous light after cold treatment 483bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.73163e-66
whkv_19040_i12f 2012 5' Shoot grown with continuous light after cold treatment 603bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.43415e-65
whkv_19040_i12r 2012 3' Shoot grown with continuous light after cold treatment 568bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.2285e-65
whkv_9070_k19f 2012 5' Shoot grown with continuous light after cold treatment 271bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 167 1.09059e-39
whkv_9070_k19r 2012 3' Shoot grown with continuous light after cold treatment 531bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whkv_3038_l11r 2012 3' Shoot grown with continuous light after cold treatment 528bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 3.44938e-63
whkv_16034_o11r 2012 3' Shoot grown with continuous light after cold treatment 40bp Contig18019            
whkv_14081_o22r 2012 3' Shoot grown with continuous light after cold treatment 489bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.92083e-66
whkv_8050_p15r 2012 3' Shoot grown with continuous light after cold treatment 523bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.25747e-66
whms_14004_m04f 2012 5' Seed DPA5 of DT3DL CS wheat 567bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.2285e-65
whms_14004_m04r 2012 3' Seed DPA5 of DT3DL CS wheat 530bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whms_6017_p05f 2012 5' Seed DPA5 of DT3DL CS wheat 567bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.2285e-65
whms_6017_p05r 2012 3' Seed DPA5 of DT3DL CS wheat 526bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.69831e-66
whpc_15015_a01f 2012 5' Anther at meiosis 601bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.43415e-65
whpc_15015_a01r 2012 3' Anther at meiosis 541bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.058e-65
whpc_18047_a10r 2012 3' Anther at meiosis 153bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 105 6.74118e-21
whpc_14061_d14f 2012 5' Anther at meiosis 591bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.37551e-65
whpc_14061_d14r 2012 3' Anther at meiosis 531bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whpc_6086_k23f 2012 5' Anther at meiosis 404bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 190 2.05665e-46
whpc_6035_n10f 2012 5' Anther at meiosis 591bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.37551e-65
whpc_6035_n10r 2012 3' Anther at meiosis 531bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whr_13052_f10r 2012 3' Root 343bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 154 9.40116e-36
whsd_17078_c20f 2012 5' Shoot grown with dessication 528bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whsd_17078_c20r 2012 3' Shoot grown with dessication 487bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.92083e-66
whsd_15009_g01f 2012 5' Shoot grown with dessication 497bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 246 1.83473e-63
whsd_7008_i03f 2012 5' Shoot grown with dessication 584bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.33184e-65
whsd_7008_i03r 2012 3' Shoot grown with dessication 302bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 168 6.37404e-40
whsd_16088_i23f 2012 5' Shoot grown with dessication 571bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.22268e-65
whsd_16088_i23r 2012 3' Shoot grown with dessication 531bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whsd_6056_j16f 2012 5' Shoot grown with dessication 578bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.28818e-65
whsd_6056_j16r 2012 3' Shoot grown with dessication 531bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whsd_16022_k08f 2012 5' Shoot grown with dessication 545bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.07494e-65
whsd_16022_k08r 2012 3' Shoot grown with dessication 499bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.79911e-66
whsd_5003_m01f 2012 5' Shoot grown with dessication 624bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.60798e-65
whsd_20020_m08f 2012 5' Shoot grown with dessication 514bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.07971e-66
whsd_17018_o07f 2012 5' Shoot grown with dessication 537bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.03596e-65
whsd_6066_p20f 2012 5' Shoot grown with dessication 588bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.37551e-65
whsd_6066_p20r 2012 3' Shoot grown with dessication 585bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.33184e-65
whsh_12049_a04f 2012 5' - 552bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.11882e-65
whsh_12049_a04r 2012 3' - 427bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.24057e-55
whsh_11017_a14r 2012 3' - 85bp Contig18019            
whsh_8050_b10r 2012 3' - 161bp Contig18019            
whsh_11027_g20r 2012 3' - 159bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 42 0.0531586
whsh_18092_h12f 2012 5' - 401bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 154 9.61497e-36
whsh_17094_l12f 2012 5' - 240bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 42 0.0525913
whsh_4055_m10r 2012 3' - 151bp Contig18019            
whsh_8024_n02f 2012 5' - 219bp Contig18019            
whsh_8024_n02r 2012 3' - 169bp Contig18019            
whsh_17088_n18f 2012 5' - 311bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 136 3.46727e-30
whsh_13088_n18r 2012 3' - 396bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 9.28605e-55
whsh_17088_n18r 2012 3' - 316bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 162 4.64642e-38
whsh_10047_o09f 2012 5' - 54bp Contig18019            
whsp_15016_b03f 2012 5' 577bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.28818e-65
whsp_15016_b03r 2012 3' 532bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 9.91872e-66
whv_1611079_a17f 2012 5' Shoot grown under cold condition for 16days 369bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 4.63221e-59
whv_1611095_b21f 2012 5' Shoot grown under cold condition for 16days 584bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.33184e-65
whv_1611095_b21r 2012 3' Shoot grown under cold condition for 16days 504bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 8.71795e-66
whv_1614096_b23f 2012 5' Shoot grown under cold condition for 16days 629bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.62971e-65
whv_1614096_b23r 2012 3' Shoot grown under cold condition for 16days 571bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.24451e-65
whv_165013_c02f 2012 5' Shoot grown under cold condition for 16days 567bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.2285e-65
whv_1615030_c07r 2012 3' Shoot grown under cold condition for 16days 71bp Contig18019       photosystemIIpolypeptide[Triticumaestivum] 51 0.000105484
whv_1618059_e13r 2012 3' Shoot grown under cold condition for 16days 343bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.21956e-56
whv_166091_e22f 2012 5' Shoot grown under cold condition for 16days 654bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.77329e-65
whv_166091_e22r 2012 3' Shoot grown under cold condition for 16days 500bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 8.21677e-56
whv_166043_f09f 2012 5' Shoot grown under cold condition for 16days 623bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 252 7.87249e-65
whv_169041_g09f 2012 5' Shoot grown under cold condition for 16days 608bp Contig18019       predictedprotein[Hordeumvulgaresubsp.vulgare] 254 1.4776e-65
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