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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 207
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxf_19015_a01f 2012 5' Seedling, infected with leaf rust 97bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 7.2632e-12
whxf_12016_a04f 2012 5' Seedling, infected with leaf rust 535bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 198 8.6232e-49
whxf_13016_a04f 2012 5' Seedling, infected with leaf rust 519bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 187 1.82367e-45
whxf_12016_a04r 2012 3' Seedling, infected with leaf rust 537bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 235 4.97984e-60
whxf_13016_a04r 2012 3' Seedling, infected with leaf rust 185bp Contig11259            
whxf_15032_a07f 2012 5' Seedling, infected with leaf rust 512bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 2.09379e-91
whxf_16032_a07f 2012 5' Seedling, infected with leaf rust 640bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.5783e-98
whxf_31032_a07f 2012 5' Seedling, infected with leaf rust 595bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 3.24153e-94
whxf_15032_a07r 2012 3' Seedling, infected with leaf rust 611bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 307 1.94913e-81
whxf_16032_a07r 2012 3' Seedling, infected with leaf rust 605bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.14822e-78
whxf_39032_a08f 2012 5' Seedling, infected with leaf rust 648bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.64441e-98
whxf_40032_a08f 2012 5' Seedling, infected with leaf rust 542bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 307 1.40405e-81
whxf_13048_a12f 2012 5' Seedling, infected with leaf rust 640bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 5.95777e-87
whxf_14048_a12f 2012 5' Seedling, infected with leaf rust 566bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 323 1.64886e-86
whxf_15048_a12f 2012 5' Seedling, infected with leaf rust 551bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 319 3.69867e-85
whxf_13048_a12r 2012 3' Seedling, infected with leaf rust 584bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.0504e-78
whxf_14048_a12r 2012 3' Seedling, infected with leaf rust 589bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.08484e-78
whxf_15048_a12r 2012 3' Seedling, infected with leaf rust 203bp Contig11259       probableUDP-sugartransporterproteinSLC35A4[Clonorchissinensis] 35 8.44014
whxf_10016_b03f 2012 5' Seedling, infected with leaf rust 646bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.61136e-98
whxf_10016_b03r 2012 3' Seedling, infected with leaf rust 345bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 106 3.02778e-21
whxf_3047_b10f 2012 5' Seedling, infected with leaf rust 654bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.74358e-98
whxf_3047_b10r 2012 3' Seedling, infected with leaf rust 463bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 209 3.30873e-52
whxf_22048_b12f 2012 5' Seedling, infected with leaf rust 593bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 2.88674e-95
whxf_22048_b12r 2012 3' Seedling, infected with leaf rust 332bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 106 2.96966e-21
whxf_31096_b23f 2012 5' Seedling, infected with leaf rust 363bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.33105e-13
whxf_34013_c02f 2012 5' Seedling, infected with leaf rust 588bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.06914e-98
whxf_35014_c04f 2012 5' Seedling, infected with leaf rust 349bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.55753e-14
whxf_36014_c04f 2012 5' Seedling, infected with leaf rust 346bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.35706e-13
whxf_21045_c10f 2012 5' Seedling, infected with leaf rust 637bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.51219e-98
whxf_21045_c10r 2012 3' Seedling, infected with leaf rust 437bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 173 1.96492e-41
whxf_27046_c12f 2012 5' Seedling, infected with leaf rust 539bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 6.826e-81
whxf_7046_c12f 2012 5' Seedling, infected with leaf rust 648bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.64441e-98
whxf_27046_c12r 2012 3' Seedling, infected with leaf rust 382bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 148 6.8577e-34
whxf_7046_c12r 2012 3' Seedling, infected with leaf rust 479bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 219 3.12687e-55
whxf_37061_c13f 2012 5' Seedling, infected with leaf rust 647bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.64441e-98
whxf_26030_d08f 2012 5' Seedling, infected with leaf rust 551bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 1.89079e-97
whxf_26030_d08r 2012 3' Seedling, infected with leaf rust 336bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 5.93848e-22
whxf_8046_d11f 2012 5' Seedling, infected with leaf rust 688bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.02645e-98
whxf_7077_d18f 2012 5' Seedling, infected with leaf rust 637bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whxf_5078_d19f 2012 5' Seedling, infected with leaf rust 689bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_5078_d19r 2012 3' Seedling, infected with leaf rust 441bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 188 4.50007e-46
whxf_28078_d20f 2012 5' Seedling, infected with leaf rust 617bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 4.16263e-95
whxf_28078_d20r 2012 3' Seedling, infected with leaf rust 594bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 275 5.85719e-72
whxf_13094_d24f 2012 5' Seedling, infected with leaf rust 623bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.42464e-98
whxf_15094_d24f 2012 5' Seedling, infected with leaf rust 402bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 278 5.76595e-73
whxf_1094_d24r 2012 3' Seedling, infected with leaf rust 517bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.72585e-56
whxf_13094_d24r 2012 3' Seedling, infected with leaf rust 487bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.36903e-56
whxf_18012_e04f 2012 5' Seedling, infected with leaf rust 646bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.61136e-98
whxf_28012_e04f 2012 5' Seedling, infected with leaf rust 54bp Contig11259            
whxf_18012_e04r 2012 3' Seedling, infected with leaf rust 623bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 293 2.35937e-77
whxf_38060_e15f 2012 5' Seedling, infected with leaf rust 638bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whxf_5075_e18f 2012 5' Seedling, infected with leaf rust 660bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 4.90122e-95
whxf_6075_e18f 2012 5' Seedling, infected with leaf rust 61bp Contig11259       ChainS,StructureOfRiceRubiscoInComplexWith6pg 47 0.00101414
whxf_5075_e18r 2012 3' Seedling, infected with leaf rust 509bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.34937e-56
whxf_35092_e24f 2012 5' Seedling, infected with leaf rust 648bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whxf_39092_e24f 2012 5' Seedling, infected with leaf rust 303bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 211 8.5749e-53
whxf_22011_f02f 2012 5' Seedling, infected with leaf rust 637bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.18775e-97
whxf_23011_f02f 2012 5' Seedling, infected with leaf rust 635bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.51219e-98
whxf_31011_f02f 2012 5' Seedling, infected with leaf rust 62bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 49 0.000455226
whxf_22011_f02r 2012 3' Seedling, infected with leaf rust 463bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 207 9.3736e-52
whxf_23011_f02r 2012 3' Seedling, infected with leaf rust 412bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 169 3.71059e-40
whxf_18028_f07f 2012 5' Seedling, infected with leaf rust 642bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.61136e-98
whxf_32028_f07f 2012 5' Seedling, infected with leaf rust 589bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 5.17867e-97
whxf_8059_f14f 2012 5' Seedling, infected with leaf rust 690bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_8059_f14r 2012 3' Seedling, infected with leaf rust 513bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 218 5.3866e-55
whxf_35060_f16f 2012 5' Seedling, infected with leaf rust 631bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.7542e-97
whxf_36060_f16f 2012 5' Seedling, infected with leaf rust 630bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.7542e-97
whxf_37060_f16f 2012 5' Seedling, infected with leaf rust 344bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 238 5.10506e-61
whxf_7075_f18f 2012 5' Seedling, infected with leaf rust 706bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 5.69058e-95
whxf_34076_f20f 2012 5' Seedling, infected with leaf rust 594bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.13589e-98
whxf_19091_f21f 2012 5' Seedling, infected with leaf rust 560bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 325 4.18414e-87
whxf_19091_f21r 2012 3' Seedling, infected with leaf rust 450bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 185 3.88173e-45
whxf_22092_f23f 2012 5' Seedling, infected with leaf rust 611bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 356 3.65889e-96
whxf_23092_f23f 2012 5' Seedling, infected with leaf rust 628bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.45785e-98
whxf_22092_f23r 2012 3' Seedling, infected with leaf rust 378bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 153 2.79529e-35
whxf_23092_f23r 2012 3' Seedling, infected with leaf rust 375bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 148 6.91237e-34
whxf_26092_f24r 2012 3' Seedling, infected with leaf rust 384bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 145 5.75911e-33
whxf_6009_g02f 2012 5' Seedling, infected with leaf rust 649bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.64441e-98
whxf_34057_g14f 2012 5' Seedling, infected with leaf rust 639bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.54525e-98
whxf_37058_g15f 2012 5' Seedling, infected with leaf rust 624bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.42464e-98
whxf_35058_g16f 2012 5' Seedling, infected with leaf rust 690bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_18073_g17f 2012 5' Seedling, infected with leaf rust 641bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.5783e-98
whxf_31073_g17f 2012 5' Seedling, infected with leaf rust 588bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 3.77962e-92
whxf_18073_g17r 2012 3' Seedling, infected with leaf rust 606bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.14822e-78
whxf_29073_g18f 2012 5' Seedling, infected with leaf rust 615bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 4.104e-95
whxf_30073_g18f 2012 5' Seedling, infected with leaf rust 361bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 245 3.13655e-63
whxf_29073_g18r 2012 3' Seedling, infected with leaf rust 496bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.2929e-56
whxf_36009_h02f 2012 5' Seedling, infected with leaf rust 664bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 1.1999e-80
whxf_37009_h02f 2012 5' Seedling, infected with leaf rust 617bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 4.16263e-95
whxf_34010_h03f 2012 5' Seedling, infected with leaf rust 598bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.16926e-98
whxf_26010_h04f 2012 5' Seedling, infected with leaf rust 552bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 7.94393e-96
whxf_26010_h04r 2012 3' Seedling, infected with leaf rust 355bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 6.00757e-22
whxf_17026_h08f 2012 5' Seedling, infected with leaf rust 689bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whxf_17026_h08r 2012 3' Seedling, infected with leaf rust 609bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.16536e-78
whxf_33057_h14f 2012 5' Seedling, infected with leaf rust 624bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.42464e-98
whxf_21058_h15f 2012 5' Seedling, infected with leaf rust 648bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whxf_30058_h15f 2012 5' Seedling, infected with leaf rust 630bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.49107e-98
whxf_21058_h15r 2012 3' Seedling, infected with leaf rust 410bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 148 6.80612e-34
whxf_21089_h22f 2012 5' Seedling, infected with leaf rust 619bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.60731e-97
whxf_22089_h22f 2012 5' Seedling, infected with leaf rust 627bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.71747e-97
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