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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 116
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_19016_a04f 2012 5' Shoot grown under cold condition for 3days 740bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv3_7016_a04f 2012 5' Shoot grown under cold condition for 3days 689bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_19016_a04r 2012 3' Shoot grown under cold condition for 3days 644bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.00409e-90
whv3_7016_a04r 2012 3' Shoot grown under cold condition for 3days 663bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.24792e-94
whv3_18032_a07f 2012 5' Shoot grown under cold condition for 3days 729bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 351 1.76539e-94
whv3_17032_a07r 2012 3' Shoot grown under cold condition for 3days 653bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_15048_a11r 2012 3' Shoot grown under cold condition for 3days 651bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.12641e-87
whv3_5096_a23f 2012 5' Shoot grown under cold condition for 3days 536bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 276 1.9492e-72
whv3_5096_a23r 2012 3' Shoot grown under cold condition for 3days 693bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whv3_15032_b07f 2012 5' Shoot grown under cold condition for 3days 688bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_15032_b07r 2012 3' Shoot grown under cold condition for 3days 674bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv3_19047_b10f 2012 5' Shoot grown under cold condition for 3days 716bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whv3_19047_b10r 2012 3' Shoot grown under cold condition for 3days 618bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 319 2.99007e-85
whv3_14063_b13f 2012 5' Shoot grown under cold condition for 3days 655bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.74358e-98
whv3_14063_b13r 2012 3' Shoot grown under cold condition for 3days 571bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 2.84257e-94
whv3_19064_b16f 2012 5' Shoot grown under cold condition for 3days 760bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv3_19064_b16r 2012 3' Shoot grown under cold condition for 3days 665bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.24792e-94
whv3_11013_c01f 2012 5' Shoot grown under cold condition for 3days 738bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.53561e-98
whv3_11013_c01r 2012 3' Shoot grown under cold condition for 3days 633bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 5.18132e-88
whv3_12014_c04f 2012 5' Shoot grown under cold condition for 3days 705bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv3_12014_c04r 2012 3' Shoot grown under cold condition for 3days 670bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 310 2.20152e-82
whv3_20061_c14r 2012 3' Shoot grown under cold condition for 3days 648bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 5.59583e-88
whv3_2062_c15f 2012 5' Shoot grown under cold condition for 3days 689bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_4062_c15f 2012 5' Shoot grown under cold condition for 3days 671bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.16427e-97
whv3_2062_c15r 2012 3' Shoot grown under cold condition for 3days 642bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 9.8203e-90
whv3_4062_c15r 2012 3' Shoot grown under cold condition for 3days 633bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.47914e-98
whv3_6078_c19f 2012 5' Shoot grown under cold condition for 3days 745bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.63382e-98
whv3_6078_c19r 2012 3' Shoot grown under cold condition for 3days 615bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 8.57724e-85
whv3_11093_c21f 2012 5' Shoot grown under cold condition for 3days 288bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00166976
whv3_11093_c21r 2012 3' Shoot grown under cold condition for 3days 271bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 73 2.79922e-11
whv3_8045_d09f 2012 5' Shoot grown under cold condition for 3days 716bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whv3_8045_d09r 2012 3' Shoot grown under cold condition for 3days 698bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_1094_d24f 2012 5' Shoot grown under cold condition for 3days 271bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 6.60108e-45
whv3_1094_d24r 2012 3' Shoot grown under cold condition for 3days 675bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.29906e-87
whv3_18011_e01f 2012 5' Shoot grown under cold condition for 3days 759bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.76477e-98
whv3_17011_e01r 2012 3' Shoot grown under cold condition for 3days 631bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 1.97837e-87
whv3_4027_e05f 2012 5' Shoot grown under cold condition for 3days 332bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 69 5.25412e-10
whv3_4027_e05r 2012 3' Shoot grown under cold condition for 3days 288bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 85 7.2261e-15
whv3_5043_e09f 2012 5' Shoot grown under cold condition for 3days 689bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_5043_e09r 2012 3' Shoot grown under cold condition for 3days 613bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 5.48018e-84
whv3_1059_e13r 2012 3' Shoot grown under cold condition for 3days 387bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 164 1.19807e-38
whv3_8059_e13r 2012 3' Shoot grown under cold condition for 3days 675bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.89486e-98
whv3_8075_e17f 2012 5' Shoot grown under cold condition for 3days 651bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whv3_8075_e17r 2012 3' Shoot grown under cold condition for 3days 653bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_18076_e19f 2012 5' Shoot grown under cold condition for 3days 694bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_17076_e19r 2012 3' Shoot grown under cold condition for 3days 653bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_14012_f04f 2012 5' Shoot grown under cold condition for 3days 288bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00166976
whv3_14012_f04r 2012 3' Shoot grown under cold condition for 3days 277bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 64 1.68028e-08
whv3_7027_f05f 2012 5' Shoot grown under cold condition for 3days 652bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whv3_7027_f05r 2012 3' Shoot grown under cold condition for 3days 670bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.19642e-90
whv3_15059_f13f 2012 5' Shoot grown under cold condition for 3days 767bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv3_15059_f13r 2012 3' Shoot grown under cold condition for 3days 631bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 1.97837e-87
whv3_13059_f14f 2012 5' Shoot grown under cold condition for 3days 702bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whv3_20060_f16f 2012 5' Shoot grown under cold condition for 3days 695bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_20060_f16r 2012 3' Shoot grown under cold condition for 3days 665bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.84275e-98
whv3_7092_f23f 2012 5' Shoot grown under cold condition for 3days 604bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 251 9.29586e-65
whv3_8092_f23f 2012 5' Shoot grown under cold condition for 3days 655bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.74358e-98
whv3_7092_f23r 2012 3' Shoot grown under cold condition for 3days 533bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 261 8.29434e-68
whv3_8092_f23r 2012 3' Shoot grown under cold condition for 3days 650bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 4.14033e-91
whv3_7092_f24r 2012 3' Shoot grown under cold condition for 3days 168bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 113 3.17234e-23
whv3_7025_g06f 2012 5' Shoot grown under cold condition for 3days 687bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_7025_g06r 2012 3' Shoot grown under cold condition for 3days 660bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.77664e-98
whv3_4057_g14f 2012 5' Shoot grown under cold condition for 3days 696bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_4057_g14r 2012 3' Shoot grown under cold condition for 3days 644bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.00409e-90
whv3_11025_h06f 2012 5' Shoot grown under cold condition for 3days 709bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.25672e-98
whv3_13041_h09f 2012 5' Shoot grown under cold condition for 3days 682bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.99355e-98
whv3_13041_h09r 2012 3' Shoot grown under cold condition for 3days 658bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.04498e-89
whv3_15058_h16f 2012 5' Shoot grown under cold condition for 3days 698bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_15058_h16r 2012 3' Shoot grown under cold condition for 3days 648bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 338 1.18978e-90
whv3_6089_h22f 2012 5' Shoot grown under cold condition for 3days 764bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whv3_6089_h22r 2012 3' Shoot grown under cold condition for 3days 702bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.81703e-91
whv3_2007_i02f 2012 5' Shoot grown under cold condition for 3days 652bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 304 1.14409e-80
whv3_2007_i02r 2012 3' Shoot grown under cold condition for 3days 647bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.10016e-87
whv3_15023_i06f 2012 5' Shoot grown under cold condition for 3days 692bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_15023_i06r 2012 3' Shoot grown under cold condition for 3days 635bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.26784e-85
whv3_6024_i08f 2012 5' Shoot grown under cold condition for 3days 733bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.47014e-98
whv3_6024_i08r 2012 3' Shoot grown under cold condition for 3days 672bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.19642e-90
whv3_3005_k02f 2012 5' Shoot grown under cold condition for 3days 652bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whv3_12021_k05f 2012 5' Shoot grown under cold condition for 3days 695bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 5.89375e-97
whv3_12021_k05r 2012 3' Shoot grown under cold condition for 3days 609bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.25857e-98
whv3_12038_k11f 2012 5' Shoot grown under cold condition for 3days 762bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv3_16038_k11f 2012 5' Shoot grown under cold condition for 3days 231bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 47 0.00165166
whv3_12038_k11r 2012 3' Shoot grown under cold condition for 3days 677bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 6.11892e-88
whv3_8054_k15r 2012 3' Shoot grown under cold condition for 3days 712bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.27371e-98
whv3_3022_l08f 2012 5' Shoot grown under cold condition for 3days 692bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_8022_l08f 2012 5' Shoot grown under cold condition for 3days 753bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv3_3022_l08r 2012 3' Shoot grown under cold condition for 3days 645bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.00409e-90
whv3_8022_l08r 2012 3' Shoot grown under cold condition for 3days 685bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 340 2.71384e-91
whv3_18037_l09f 2012 5' Shoot grown under cold condition for 3days 705bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whv3_17037_l09r 2012 3' Shoot grown under cold condition for 3days 656bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.17892e-87
whv3_20052_m15f 2012 5' Shoot grown under cold condition for 3days 701bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whv3_20052_m15r 2012 3' Shoot grown under cold condition for 3days 663bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 348 1.22158e-93
whv3_20052_m16f 2012 5' Shoot grown under cold condition for 3days 697bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_20052_m16r 2012 3' Shoot grown under cold condition for 3days 598bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 305 7.01072e-81
whv3_3084_m23f 2012 5' Shoot grown under cold condition for 3days 695bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_3084_m23r 2012 3' Shoot grown under cold condition for 3days 678bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.09483e-92
whv3_20004_n03r 2012 3' Shoot grown under cold condition for 3days 330bp Contig6300       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 134 1.01829e-29
whv3_6067_n18f 2012 5' Shoot grown under cold condition for 3days 729bp Contig6300       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 283 9.23446e-86
whv3_6067_n18r 2012 3' Shoot grown under cold condition for 3days 643bp Contig6300       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.40109e-80
whv3_16083_n21f 2012 5' Shoot grown under cold condition for 3days 691bp Contig6300       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
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