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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 162
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_1015_a01f 2012 5' Shoot grown under cold condition for 3days 217bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 136 2.02579e-30
whv3_15015_a01f 2012 5' Shoot grown under cold condition for 3days 726bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.4374e-98
whv3_1015_a01r 2012 3' Shoot grown under cold condition for 3days 648bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 322 5.23754e-86
whv3_15015_a01r 2012 3' Shoot grown under cold condition for 3days 622bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 295 6.12383e-78
whv3_14015_a02f 2012 5' Shoot grown under cold condition for 3days 732bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.50287e-98
whv3_14015_a02r 2012 3' Shoot grown under cold condition for 3days 678bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.42411e-94
whv3_15016_a03f 2012 5' Shoot grown under cold condition for 3days 575bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 227 1.26928e-57
whv3_15016_a03r 2012 3' Shoot grown under cold condition for 3days 548bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 244 1.48247e-62
whv3_14079_a18f 2012 5' Shoot grown under cold condition for 3days 718bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.33919e-98
whv3_14079_a18r 2012 3' Shoot grown under cold condition for 3days 662bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.1563e-90
whv3_8080_a20f 2012 5' Shoot grown under cold condition for 3days 691bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_8080_a20r 2012 3' Shoot grown under cold condition for 3days 668bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 336 3.76463e-90
whv3_13095_a22f 2012 5' Shoot grown under cold condition for 3days 643bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.61136e-98
whv3_13095_a22r 2012 3' Shoot grown under cold condition for 3days 690bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.24496e-91
whv3_9016_b04f 2012 5' Shoot grown under cold condition for 3days 652bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whv3_9016_b04r 2012 3' Shoot grown under cold condition for 3days 639bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.38978e-85
whv3_16031_b05f 2012 5' Shoot grown under cold condition for 3days 700bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_16031_b05r 2012 3' Shoot grown under cold condition for 3days 677bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.09483e-92
whv3_8048_b11f 2012 5' Shoot grown under cold condition for 3days 687bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_8048_b11r 2012 3' Shoot grown under cold condition for 3days 695bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.50225e-92
whv3_6048_b12f 2012 5' Shoot grown under cold condition for 3days 697bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.24482e-88
whv3_6048_b12r 2012 3' Shoot grown under cold condition for 3days 667bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.79766e-84
whv3_17079_b17f 2012 5' Shoot grown under cold condition for 3days 650bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whv3_18079_b17r 2012 3' Shoot grown under cold condition for 3days 668bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.02217e-92
whv3_10079_b18f 2012 5' Shoot grown under cold condition for 3days 650bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.60882e-80
whv3_10079_b18r 2012 3' Shoot grown under cold condition for 3days 652bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 310 2.0596e-82
whv3_8080_b19f 2012 5' Shoot grown under cold condition for 3days 679bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv3_8080_b19r 2012 3' Shoot grown under cold condition for 3days 683bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.2974e-90
whv3_4095_b21f 2012 5' Shoot grown under cold condition for 3days 695bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_3095_b22f 2012 5' Shoot grown under cold condition for 3days 691bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_3095_b22r 2012 3' Shoot grown under cold condition for 3days 683bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.2974e-90
whv3_20013_c02f 2012 5' Shoot grown under cold condition for 3days 755bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv3_20013_c02r 2012 3' Shoot grown under cold condition for 3days 691bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.62228e-91
whv3_1078_c20f 2012 5' Shoot grown under cold condition for 3days 48bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 41 0.0545085
whv3_1078_c20r 2012 3' Shoot grown under cold condition for 3days 472bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 186 2.95991e-45
whv3_9093_c21f 2012 5' Shoot grown under cold condition for 3days 701bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whv3_9093_c21r 2012 3' Shoot grown under cold condition for 3days 692bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.17778e-89
whv3_3094_c24f 2012 5' Shoot grown under cold condition for 3days 674bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.89486e-98
whv3_3094_c24r 2012 3' Shoot grown under cold condition for 3days 652bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.40245e-84
whv3_14014_d03f 2012 5' Shoot grown under cold condition for 3days 700bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whv3_14014_d03r 2012 3' Shoot grown under cold condition for 3days 656bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.01215e-84
whv3_1046_d11f 2012 5' Shoot grown under cold condition for 3days 491bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.03304e-86
whv3_1046_d11r 2012 3' Shoot grown under cold condition for 3days 692bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.32488e-92
whv3_18059_e13f 2012 5' Shoot grown under cold condition for 3days 697bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_19059_e13f 2012 5' Shoot grown under cold condition for 3days 691bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_17059_e13r 2012 3' Shoot grown under cold condition for 3days 655bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.04498e-89
whv3_19059_e13r 2012 3' Shoot grown under cold condition for 3days 698bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 336 3.16536e-90
whv3_14091_e22f 2012 5' Shoot grown under cold condition for 3days 739bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv3_14091_e22r 2012 3' Shoot grown under cold condition for 3days 336bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 108 5.96108e-22
whv3_3092_e23f 2012 5' Shoot grown under cold condition for 3days 730bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.4374e-98
whv3_3092_e23r 2012 3' Shoot grown under cold condition for 3days 654bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.99951e-85
whv3_8011_f02f 2012 5' Shoot grown under cold condition for 3days 725bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv3_8011_f02r 2012 3' Shoot grown under cold condition for 3days 691bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.32488e-92
whv3_13009_g02f 2012 5' Shoot grown under cold condition for 3days 652bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.67747e-98
whv3_13009_g02r 2012 3' Shoot grown under cold condition for 3days 371bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 263 1.93316e-68
whv3_16010_g04f 2012 5' Shoot grown under cold condition for 3days 719bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.33919e-98
whv3_16010_g04r 2012 3' Shoot grown under cold condition for 3days 696bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.19031e-89
whv3_1025_g05r 2012 3' Shoot grown under cold condition for 3days 642bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.5783e-98
whv3_7026_g07f 2012 5' Shoot grown under cold condition for 3days 719bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.33919e-98
whv3_7026_g07r 2012 3' Shoot grown under cold condition for 3days 699bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.53388e-92
whv3_19041_g09f 2012 5' Shoot grown under cold condition for 3days 726bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv3_19041_g09r 2012 3' Shoot grown under cold condition for 3days 681bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.12766e-89
whv3_9057_g14r 2012 3' Shoot grown under cold condition for 3days 699bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.53388e-92
whv3_12073_g17f 2012 5' Shoot grown under cold condition for 3days 680bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv3_13073_g17f 2012 5' Shoot grown under cold condition for 3days 689bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_16073_g17f 2012 5' Shoot grown under cold condition for 3days 599bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 257 2.17905e-66
whv3_3073_g17f 2012 5' Shoot grown under cold condition for 3days 687bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_12073_g17r 2012 3' Shoot grown under cold condition for 3days 679bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.23749e-89
whv3_13073_g17r 2012 3' Shoot grown under cold condition for 3days 674bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 6.05017e-88
whv3_16073_g17r 2012 3' Shoot grown under cold condition for 3days 560bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 269 2.72469e-70
whv3_3073_g17r 2012 3' Shoot grown under cold condition for 3days 659bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.88347e-92
whv3_10074_g20f 2012 5' Shoot grown under cold condition for 3days 730bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.30621e-97
whv3_10074_g20r 2012 3' Shoot grown under cold condition for 3days 629bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 5.95672e-84
whv3_15089_g22f 2012 5' Shoot grown under cold condition for 3days 555bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 1.25251e-88
whv3_15089_g22r 2012 3' Shoot grown under cold condition for 3days 555bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 242 4.48587e-62
whv3_15057_h14f 2012 5' Shoot grown under cold condition for 3days 741bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv3_15057_h14r 2012 3' Shoot grown under cold condition for 3days 582bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.03318e-78
whv3_1074_h19f 2012 5' Shoot grown under cold condition for 3days 292bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 6.65291e-45
whv3_1074_h19r 2012 3' Shoot grown under cold condition for 3days 657bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.90882e-83
whv3_16023_i05f 2012 5' Shoot grown under cold condition for 3days 694bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_16023_i05r 2012 3' Shoot grown under cold condition for 3days 655bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.04498e-89
whv3_20055_i14f 2012 5' Shoot grown under cold condition for 3days 779bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.94195e-98
whv3_6055_i14f 2012 5' Shoot grown under cold condition for 3days 688bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_20055_i14r 2012 3' Shoot grown under cold condition for 3days 680bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.2048e-91
whv3_6055_i14r 2012 3' Shoot grown under cold condition for 3days 685bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.32265e-90
whv3_20072_i19f 2012 5' Shoot grown under cold condition for 3days 729bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.47014e-98
whv3_20072_i19r 2012 3' Shoot grown under cold condition for 3days 661bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.9297e-92
whv3_7087_i21f 2012 5' Shoot grown under cold condition for 3days 766bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv3_7087_i21r 2012 3' Shoot grown under cold condition for 3days 672bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 346 3.66201e-93
whv3_9008_j03f 2012 5' Shoot grown under cold condition for 3days 125bp Contig11259            
whv3_14023_j05f 2012 5' Shoot grown under cold condition for 3days 706bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.50892e-92
whv3_14023_j05r 2012 3' Shoot grown under cold condition for 3days 682bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.2851e-89
whv3_16039_j09f 2012 5' Shoot grown under cold condition for 3days 687bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_16039_j09r 2012 3' Shoot grown under cold condition for 3days 663bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 5.87217e-88
whv3_3040_j11f 2012 5' Shoot grown under cold condition for 3days 678bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whv3_3040_j11r 2012 3' Shoot grown under cold condition for 3days 700bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.53388e-92
whv3_14055_j13f 2012 5' Shoot grown under cold condition for 3days 681bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv3_14055_j13r 2012 3' Shoot grown under cold condition for 3days 687bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.17393e-88
whv3_11056_j16f 2012 5' Shoot grown under cold condition for 3days 675bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whv3_11056_j16r 2012 3' Shoot grown under cold condition for 3days 687bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.32265e-90
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