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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 27
First Previous 1-27 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_15037_l09r 2012 3' Callus 728bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 265 9.75468e-69
whkp_6053_k14r 2012 3' Shoot grown under continuous light 77bp Contig251       PREDICTED:DEAD-boxATP-dependentRNAhelicase37-like[Brachypodiumdistachyon] 56 2.72901e-06
whpc_17038_k12f 2012 5' Anther at meiosis 678bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 310 2.97442e-82
whpc_17038_k12r 2012 3' Anther at meiosis 647bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 319 3.35296e-85
whrd_19016_b03r 2012 3' Root of dessiccated seed 595bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 265 6.15595e-69
whrd_11056_j15r 2012 3' Root of dessiccated seed 649bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 214 1.5191e-53
whsc_17041_h10f 2012 5' Shoot grown with cold treatment 354bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 212 3.85804e-53
whsc_17041_h10r 2012 3' Shoot grown with cold treatment 571bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 241 8.20126e-62
whsd_7004_n03r 2012 3' Shoot grown with dessication 721bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 340 2.34055e-91
whsd_2035_n10r 2012 3' Shoot grown with dessication 54bp Contig251            
whxb_10095_a21f 2012 5' Root 405bp Contig251       PREDICTED:DEAD-boxATP-dependentRNAhelicase37-like[Brachypodiumdistachyon] 277 9.75488e-73
whxb_10095_a21r 2012 3' Root 266bp Contig251       hypotheticalproteinEAI_03683[Harpegnathossaltator] 71 1.39413e-10
whxd_6030_d08f 2012 5' Root, treated at 50 microM Al for 6h 266bp Contig251            
whxd_7030_d08f 2012 5' Root, treated at 50 microM Al for 6h 252bp Contig251            
whxd_6030_d08r 2012 3' Root, treated at 50 microM Al for 6h 212bp Contig251       GF14078[Drosophilaananassae] 31 0.0518371
whxd_7030_d08r 2012 3' Root, treated at 50 microM Al for 6h 222bp Contig251       GF14078[Drosophilaananassae] 31 0.0532703
whxd_27075_e18f 2012 5' Root, treated at 50 microM Al for 6h 425bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 241 5.97569e-62
whxd_27075_e18r 2012 3' Root, treated at 50 microM Al for 6h 601bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 245 8.70066e-63
whxd_28075_e18r 2012 3' Root, treated at 50 microM Al for 6h 361bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 101 7.31527e-20
whxd_38042_h12r 2012 3' Root, treated at 50 microM Al for 6h 122bp Contig251            
whxd_30084_m23f 2012 5' Root, treated at 50 microM Al for 6h 93bp Contig251       PREDICTED:DEAD-boxATP-dependentRNAhelicase52C-like[Brachypodiumdistachyon] 55 5.9732e-06
whxf_21003_n01f 2012 5' Seedling, infected with leaf rust 398bp Contig251       PREDICTED:DEAD-boxATP-dependentRNAhelicase37-like[Brachypodiumdistachyon] 271 5.4188e-71
whxf_21003_n01r 2012 3' Seedling, infected with leaf rust 387bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 126 2.75728e-27
HX007308 whxi_14053_l14r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 363bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 110 1.56868e-22
HX019884 whxk_12015_a02r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 315bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 91 9.75775e-17
whxv_8085_k21r 2012 3' Leaves, plant was grown at constant 23Ž 257bp Contig251       hypotheticalproteinEAI_03683[Harpegnathossaltator] 63 3.83657e-08
whxx_6092_e23r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 722bp Contig251       Os03g0805200[OryzasativaJaponicaGroup] 347 2.50067e-93
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