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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 42
First Previous 1-42 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_7095_a21f 2012 5' Dormant seed with water absorption after breaking 323bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 77 1.49398e-12
whf_28011_g07f 2012 5' Spike at flowering date 439bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 152 3.5739e-35
whkv_4027_f06r 2012 3' Shoot grown with continuous light after cold treatment 486bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 212 5.10041e-53
whkv_16026_g07r 2012 3' Shoot grown with continuous light after cold treatment 614bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 293 2.26241e-77
whsd_10025_g06r 2012 3' Shoot grown with dessication 682bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 276 4.81265e-72
whsl_17060_g16r 2012 3' Seed DPA30 430bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 185 6.5818e-45
whv_1610011_e02r 2012 3' Shoot grown under cold condition for 16days 733bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 370 2.83875e-100
whvs_16096_a24r 2012 3' Liquid cultured tissue 717bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 367 2.31246e-99
whvs_6071_j18r 2012 3' Liquid cultured tissue 718bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 365 6.72823e-99
whxa_15031_a05r 2012 3' Root 639bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 295 8.62297e-78
whxa_10087_j21r 2012 3' Root 607bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 297 1.9878e-78
whxa_26022_k07r 2012 3' Root 563bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 262 4.43059e-68
whxa_19050_o15r 2012 3' Root 590bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 281 1.37233e-73
whxb_11015_a01f 2012 5' Root 490bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 316 2.49658e-84
whxb_31008_j03r 2012 3' Root 565bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 302 3.93367e-80
whxb_39050_p15r 2012 3' Root 654bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 318 1.3219e-84
whxc_10063_a14r 2012 3' Root, treated at 50 microM Al for 6h 587bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 281 1.03407e-73
whxc_37030_c07r 2012 3' Root, treated at 50 microM Al for 6h 544bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 235 5.16725e-60
whxc_13022_k07r 2012 3' Root, treated at 50 microM Al for 6h 572bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 283 2.50179e-74
whxc_3082_p23r 2012 3' Root, treated at 50 microM Al for 6h 609bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 297 2.01703e-78
whxd_3090_h24r 2012 3' Root, treated at 50 microM Al for 6h 611bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 302 4.80087e-80
whxd_17083_m22r 2012 3' Root, treated at 50 microM Al for 6h 616bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 291 8.71997e-77
whxd_36035_n09r 2012 3' Root, treated at 50 microM Al for 6h 502bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 232 4.65496e-59
whxe_24058_g16r 2012 3' Seedling, infected with leaf rust 595bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 283 2.80903e-74
whxe_24038_k11r 2012 3' Seedling, infected with leaf rust 609bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 297 2.01703e-78
whxf_5053_k13r 2012 3' Seedling, infected with leaf rust 476bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 221 8.26571e-56
whxf_15054_l15r 2012 3' Seedling, infected with leaf rust 620bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 302 5.00961e-80
whxh_33094_d23r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 472bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 233 2.12083e-59
whxh_40043_f10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 589bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 291 1.01538e-76
HX047757 whxm_5019_m05r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 275bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 96 4.00429e-18
HX080510 whxo_20070_k19f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 67bp Contig5555            
HX135714 whxr_15024_j07r 2012 3' Roots, 18 day old plants were grown hydroponically 763bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 389 4.92417e-106
HX139421 whxr_4020_m08r 2012 3' Roots, 18 day old plants were grown hydroponically 565bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 266 4.08016e-69
HX141236 whxr_2083_n21f 2012 5' Roots, 18 day old plants were grown hydroponically 758bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 357 2.0658e-96
HX154753 whxs_1024_j07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 669bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 289 6.89267e-76
HX154936 whxs_14039_j10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 563bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 266 4.0073e-69
HX159185 whxs_13083_m21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 762bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 389 4.94821e-106
HX180673 whxt_27018_o07r 2012 3' Roots, 18 day old plants were grown hydroponically 762bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 389 4.94821e-106
whxw_5007_i02r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 277bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 83 2.67639e-14
whyd_27082_b12r 2012 3' Spikelet at late flowering 341bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 131 1.1131e-28
whyd_27039_j09f 2012 5' Spikelet at late flowering 505bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 194 8.40789e-48
whyd_27038_j09r 2012 3' Spikelet at late flowering 460bp Contig5555       PREDICTED:heatshockcognate70kDaprotein1-likeisoform1[Brachypodiumdistachyon] 194 8.24787e-48
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