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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 18
First Previous 1-18 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whrd_12016_a04f 2012 5' Root of dessiccated seed 309bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 3.25725e-28
whrd_12016_a04r 2012 3' Root of dessiccated seed 313bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 169 2.81939e-40
whrd_12034_o11f 2012 5' Root of dessiccated seed 309bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 3.25725e-28
whrd_12034_o11r 2012 3' Root of dessiccated seed 306bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 169 2.85073e-40
whxe_24003_n01r 2012 3' Seedling, infected with leaf rust 449bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 240 1.32796e-61
whxe_22002_o04r 2012 3' Seedling, infected with leaf rust 130bp Contig18333            
HX017885 whxj_19067_m17f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 416bp Contig18333       PREDICTED:phosphatecarrierprotein,mitochondrial-like[Brachypodiumdistachyon] 283 1.7558e-74
HX017897 whxj_19067_m17r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 369bp Contig18333       PREDICTED:phosphatecarrierprotein,mitochondrial-like[Brachypodiumdistachyon] 245 4.04862e-63
HX028144 whxk_1067_m17f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 390bp Contig18333       PREDICTED:phosphatecarrierprotein,mitochondrial-like[Brachypodiumdistachyon] 264 8.47245e-69
HX028157 whxk_1067_m17r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 400bp Contig18333       PREDICTED:phosphatecarrierprotein,mitochondrial-like[Brachypodiumdistachyon] 263 1.9273e-68
HX084482 whxo_12065_p18f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 270bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 103 3.29896e-20
HX084501 whxo_12065_p18r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 237bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 123 1.80116e-26
HX161856 whxs_15001_p01f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 628bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 5.36269e-101
HX161882 whxs_15001_p01r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 775bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 460 2.34983e-127
HX162330 whxs_25033_p10f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 634bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 5.40818e-101
HX162357 whxs_25033_p10r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 745bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 494 1.04509e-137
whxx_3024_i08f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 638bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 5.47934e-101
whxx_3024_i08r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 773bp Contig18333       predictedprotein[Hordeumvulgaresubsp.vulgare] 453 3.72031e-125
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