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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 31
First Previous 1-31 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ209706 wh15f04 2002 5' Spike at meiosis 179bp Contig15801 Contig15801 P05621 GO:0005634 nucleus      
BJ217145 rwh15f04 2002 3' Spike at meiosis 541bp Contig15801 Contig15801 P51823 GO:0005794 Golgi apparatus translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0166452
BJ287662 whsl10d18 2002 5' Seed DPA30 644bp Contig15801 Contig15801 P59169 Q06194 Q06194 GO:0000786 GO:0006953 GO:0007596 nucleosome ,  acute-phase response ,  blood coagulation cell division FtsK/SpoIIIE [Saccharopolyspora erythraea NRRL 2338] 83 1.4448
BJ288379 whsl14c20 2002 5' Seed DPA30 715bp Contig15801 Contig15801 P58223 GO:0003723 RNA binding Os07g0606000 [Oryza sativa (japonica cultivar-group)] 92 0.161456
BJ290503 whsl19b12 2002 5' Seed DPA30 454bp Contig15801 Contig15801 P45095 P45095 P45095 P45095 P45095 GO:0005524 GO:0006810 GO:0006857 GO:0015198 GO:0019866 ATP binding ,  transport ,  oligopeptide transport ,  oligopeptide transporter activity ,  inner membrane tegument protein VP22 [Macacine herpesvirus 1] 80 1.49812
BJ291884 whsl25e03 2002 5' Seed DPA30 524bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0154591
BJ292263 whsl26p21 2002 5' Seed DPA30 318bp Contig15801 Contig15801 P55198 P55198 GO:0005634 GO:0008151 nucleus ,  cell growth and/or maintenance hypothetical protein [Angiococcus disciformis] 89 0.137434
BJ289623 whsl6f05 2002 5' Seed DPA30 668bp Contig15801 Contig15801 Q06194 Q06194 GO:0006953 GO:0007596 acute-phase response ,  blood coagulation cell division FtsK/SpoIIIE [Saccharopolyspora erythraea NRRL 2338] 83 1.55656
BJ293962 rwhsl10d18 2002 3' Seed DPA30 697bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0314505
BJ296699 rwhsl14c20 2002 3' Seed DPA30 695bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0311422
BJ297084 rwhsl19b12 2002 3' Seed DPA30 665bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0280588
BJ297353 rwhsl20b12 2002 3' Seed DPA30 105bp Contig15801 Contig15801            
BJ298505 rwhsl25e03 2002 3' Seed DPA30 494bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0126769
BJ298846 rwhsl26p21 2002 3' Seed DPA30 197bp Contig15801 Contig15801       transcription factor which mediates glucose repression [Pichia stipitis CBS 6054] 79 1.97309
BJ295949 rwhsl6f05 2002 3' Seed DPA30 681bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0296005
BJ246979 whf26k18 2002 5' Spike at flowering date 618bp Contig15801 Contig15801 Q06194 Q06194 GO:0006953 GO:0007596 acute-phase response ,  blood coagulation cell division FtsK/SpoIIIE [Saccharopolyspora erythraea NRRL 2338] 83 1.33193
BJ252954 rwhf26k18 2002 3' Spike at flowering date 571bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0196957
BJ258227 whh6h15 2002 5' Spike at heading date 380bp Contig15801 Contig15801 P28167 P28167 P28167 GO:0003677 GO:0003677 GO:0005634 DNA binding ,  DNA binding ,  nucleus tegument protein VP22 [Macacine herpesvirus 1] 81 1.15422
BJ258540 whh8e24 2002 5' Spike at heading date 665bp Contig15801 Contig15801 Q06194 Q06194 GO:0006953 GO:0007596 acute-phase response ,  blood coagulation cell division FtsK/SpoIIIE [Saccharopolyspora erythraea NRRL 2338] 84 1.17886
BJ263829 rwhh6h15 2002 3' Spike at heading date 696bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0311422
BJ264665 rwhh8e24 2002 3' Spike at heading date 467bp Contig15801 Contig15801 Q9GKY1 Q9GKY1 Q9GKY1 Q9GKY1 Q9GKY1 GO:0006810 GO:0006811 GO:0015297 GO:0015380 GO:0016021 transport ,  ion transport ,  antiporter activity ,  anion exchanger activity ,  integral to membrane translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0124236
BJ267834 whoh13i14 2002 5' Pistil at heading date 490bp Contig15801 Contig15801 Q06194 Q06194 GO:0006953 GO:0007596 acute-phase response ,  blood coagulation tegument protein VP22 [Macacine herpesvirus 1] 81 1.15686
BJ272770 rwhoh13i14 2002 3' Pistil at heading date 587bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0212588
BJ301054 whyd5m10 2002 5' Spikelet at late flowering 665bp Contig15801 Contig15801 P55198 P55198 GO:0005634 GO:0008151 nucleus ,  cell growth and/or maintenance Os07g0606000 [Oryza sativa (japonica cultivar-group)] 92 0.139254
BJ306867 rwhyd5m10 2002 3' Spikelet at late flowering 703bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0320672
BJ312834 whyf12e06 2002 5' Spikelet at early flowering 657bp Contig15801 Contig15801       PREDICTED: hypothetical protein [Pan troglodytes] 86 0.686689
BJ315305 whyf16m04 2002 5' Spikelet at early flowering 684bp Contig15801 Contig15801 O88454 O88454 O88454 O88454 O88454 GO:0005216 GO:0005244 GO:0006810 GO:0006811 GO:0016021 ion channel activity ,  voltage-gated ion channel activity ,  transport ,  ion transport ,  integral to membrane Os07g0606000 [Oryza sativa (japonica cultivar-group)] 92 0.148436
BJ317068 whyf26c22 2002 5' Spikelet at early flowering 623bp Contig15801 Contig15801 Q06194 Q06194 GO:0006953 GO:0007596 acute-phase response ,  blood coagulation cell division FtsK/SpoIIIE [Saccharopolyspora erythraea NRRL 2338] 83 1.34901
BJ318568 rwhyf12e06 2002 3' Spikelet at early flowering 681bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 96 0.0510167
BJ320793 rwhyf16m04 2002 3' Spikelet at early flowering 734bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0346806
BJ322607 rwhyf26c22 2002 3' Spikelet at early flowering 696bp Contig15801 Contig15801       translation initiation factor IF-2 [Acidothermus cellulolyticus 11B] 98 0.0311422
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