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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 26
First Previous 1-26 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ287717 whsl10i19 2002 5' Seed DPA30 444bp Contig15648 Contig15648 Q8X400 P15869 P15869 P15869 GO:0016021 GO:0003677 GO:0005634 GO:0005694 integral to membrane ,  DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 1.90174e-48
BJ293118 whsl30l20 2002 5' Seed DPA30 684bp Contig15648 Contig15648 P05690 GO:0045735 nutrient reservoir activity histone deacetylase HDAC2 [Triticum aestivum] 595 7.00416e-60
BJ294018 rwhsl10i19 2002 3' Seed DPA30 573bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 3.10101e-48
BJ299506 rwhsl30l20 2002 3' Seed DPA30 692bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 4.85467e-48
BJ222721 whdl15i17 2002 5' Crown of seedling 614bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 495 2.18309e-48
BJ227699 rwhdl15i17 2002 3' Crown of seedling 688bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 4.80613e-48
BJ231993 whe10h17 2002 5' Seed DPA10 149bp Contig15648 Contig15648 Q08865 Q08865 Q08865 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 149 1.52407e-08
BJ237605 rwhe10h17 2002 3' Seed DPA10 470bp Contig15648 Contig15648 Q9MYX8 GO:0005856 cytoskeleton histone deacetylase HDAC2 [Triticum aestivum] 415 2.1582e-39
BJ267554 whoh12c12 2002 5' Pistil at heading date 637bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 4.04807e-48
BJ271469 whoh26a03 2002 5' Pistil at heading date 699bp Contig15648 Contig15648 P05690 GO:0045735 nutrient reservoir activity histone deacetylase HDAC2 [Triticum aestivum] 595 1.15245e-60
BJ271671 whoh27a03 2002 5' Pistil at heading date 626bp Contig15648 Contig15648 P05690 GO:0045735 nutrient reservoir activity histone deacetylase HDAC2 [Triticum aestivum] 595 5.73088e-60
BJ272504 rwhoh12c12 2002 3' Pistil at heading date 692bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 4.85467e-48
BJ276699 rwhoh26a03 2002 3' Pistil at heading date 539bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 2.62073e-48
BJ276886 rwhoh27a03 2002 3' Pistil at heading date 664bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 514 1.62223e-50
BJ302712 whyd16h03 2002 5' Spikelet at late flowering 575bp Contig15648 Contig15648 Q9UQ96 GO:0005856 cytoskeleton histone deacetylase HDAC2 [Triticum aestivum] 429 8.30936e-41
BJ303687 whyd20k22 2002 5' Spikelet at late flowering 262bp Contig15648 Contig15648 P28159 P28159 P28159 P28159 P28159 GO:0003677 GO:0005634 GO:0006310 GO:0006313 GO:0007275 DNA binding ,  nucleus ,  DNA recombination ,  DNA transposition ,  development latent transforming growth factor beta binding protein like (3F865) [Cryptosporidium parvum Iowa II] 76 4.40427
BJ305264 whyd29h19 2002 5' Spikelet at late flowering 559bp Contig15648 Contig15648 Q87DN2 Q87DN2 Q87DN2 Q87DN2 GO:0005524 GO:0006164 GO:0006541 GO:0016874 ATP binding ,  purine nucleotide biosynthesis ,  glutamine metabolism ,  ligase activity histone deacetylase HDAC2 [Triticum aestivum] 397 3.93415e-37
BJ308553 rwhyd16h03 2002 3' Spikelet at late flowering 505bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 452 1.24669e-43
BJ309567 rwhyd20k22 2002 3' Spikelet at late flowering 208bp Contig15648 Contig15648            
BJ311814 rwhyd29h19 2002 3' Spikelet at late flowering 689bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 4.80613e-48
BJ312707 whyf11j04 2002 5' Spikelet at early flowering 717bp Contig15648 Contig15648 P05690 GO:0045735 nutrient reservoir activity histone deacetylase HDAC2 [Triticum aestivum] 595 7.76226e-60
BJ314751 whyf14c20 2002 5' Spikelet at early flowering 688bp Contig15648 Contig15648 P05690 GO:0045735 nutrient reservoir activity histone deacetylase HDAC2 [Triticum aestivum] 595 7.07637e-60
BJ316456 whyf23d18 2002 5' Spikelet at early flowering 433bp Contig15648 Contig15648 P05690 GO:0045735 nutrient reservoir activity histone deacetylase HDAC2 [Triticum aestivum] 520 1.42509e-51
BJ318433 rwhyf11j04 2002 3' Spikelet at early flowering 714bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 5.12208e-48
BJ320234 rwhyf14c20 2002 3' Spikelet at early flowering 663bp Contig15648 Contig15648 P15869 P15869 P15869 GO:0003677 GO:0005634 GO:0005694 DNA binding ,  nucleus ,  chromosome histone deacetylase HDAC2 [Triticum aestivum] 493 4.43825e-48
BJ321981 rwhyf23d18 2002 3' Spikelet at early flowering 487bp Contig15648 Contig15648 P16415 P16415 P16415 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent histone deacetylase HDAC2 [Triticum aestivum] 371 2.7404e-34
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