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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 20
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10048_b12f 2012 5' Callus 674bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 398 8.12035e-109
whe_4016_p01f 2012 5' Seed DPA10 568bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 318 6.89464e-85
whms_7051_n13f 2012 5' Seed DPA5 of DT3DL CS wheat 569bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 378 5.61407e-103
whpc_3022_k07f 2012 5' Anther at meiosis 694bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 459 3.20414e-127
whrd_20016_a03f 2012 5' Root of dessiccated seed 628bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 415 7.21435e-114
whsd_11054_l16f 2012 5' Shoot grown with dessication 557bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 345 3.83481e-93
whsl_4049_n09f 2012 5' Seed DPA30 307bp Contig1025       predictedprotein[Hordeumvulgaresubsp.vulgare] 207 9.41142e-52
whxa_2050_p15f 2012 5' Root 506bp Contig1025       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 8.62046e-77
whxc_5004_m04f 2012 5' Root, treated at 50 microM Al for 6h 561bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 370 1.48128e-100
whxf_36036_m12f 2012 5' Seedling, infected with leaf rust 606bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 349 2.54613e-94
whxh_33062_d16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 624bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 412 4.55151e-113
whxh_34062_d16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 613bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 410 1.65849e-112
whxh_35054_k15f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 613bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 376 2.65397e-102
whxh_31020_n07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 423bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 270 1.20632e-70
HX025728 whxk_9088_i23f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 425bp Contig1025       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 1.12436e-68
HX048202 whxm_3084_m23f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 384bp Contig1025       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 7.21801e-60
HX078158 whxo_24074_h20f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 671bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 442 4.84793e-122
HX169609 whxt_8028_f07f 2012 5' Roots, 18 day old plants were grown hydroponically 706bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 442 5.5166e-122
HX183901 whxu_18096_a24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 705bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 440 2.07513e-121
whxv_6024_i07f 2012 5' Leaves, plant was grown at constant 23℃ 683bp Contig1025       PREDICTED:dnaJproteinhomolog2-like[Brachypodiumdistachyon] 426 3.76059e-117
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