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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 40
First Previous 1-40 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ267485 whoh11m04 2002 5' Pistil at heading date 575bp Contig16291 Contig16291 Q43292 GO:0003735 structural constituent of ribosome unknown [Zea mays] 439 5.75441e-42
BJ267530 whoh12a08 2002 5' Pistil at heading date 265bp Contig16291 Contig16291 Q43292 GO:0003735 structural constituent of ribosome unknown [Zea mays] 369 4.64595e-34
BJ267857 whoh13k11 2002 5' Pistil at heading date 682bp Contig16291 Contig16291 Q41764 GO:0003779 actin binding hypothetical protein OsI_013601 [Oryza sativa (indica cultivar-group)] 495 2.7607e-48
BJ268462 whoh17b18 2002 5' Pistil at heading date 215bp Contig16291 Contig16291 P55330 P55330 P55330 P55330 GO:0005975 GO:0005975 GO:0016787 GO:0016798 carbohydrate metabolism ,  carbohydrate metabolism ,  hydrolase activity ,  hydrolase activity, acting on glycosyl bonds PREDICTED: similar to Phospholipase C, epsilon 1 isoform 1 [Equus caballus] 75 5.62917
BJ271253 whoh1a07 2002 5' Pistil at heading date 415bp Contig16291 Contig16291 P22739 P22739 P22739 P22739 P22739 P22739 GO:0005216 GO:0005244 GO:0006810 GO:0006811 GO:0006813 GO:0016021 ion channel activity ,  voltage-gated ion channel activity ,  transport ,  ion transport ,  potassium ion transport ,  integral to membrane hypothetical protein Bm1_17870 [Brugia malayi] 231 4.61219e-18
BJ271438 whoh1n15 2002 5' Pistil at heading date 417bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome 60s ribosomal protein L21 [Triticum aestivum] 704 6.52583e-73
BJ269228 whoh21a08 2002 5' Pistil at heading date 571bp Contig16291 Contig16291 P48534 P48534 P48534 GO:0004601 GO:0004601 GO:0016491 peroxidase activity ,  peroxidase activity ,  oxidoreductase activity ascorbate peroxidase [Hordeum vulgare subsp. vulgare] 765 8.93926e-80
BJ269650 whoh22o20 2002 5' Pistil at heading date 513bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome 60s ribosomal protein L21 [Triticum aestivum] 875 1.1573e-92
BJ270871 whoh23a09 2002 5' Pistil at heading date 600bp Contig16291 Contig16291 P17784 P17784 GO:0006096 GO:0016829 glycolysis ,  lyase activity putative fructose 1-,6-biphosphate aldolase [Triticum aestivum] 501 4.10938e-49
BJ270894 whoh23c17 2002 5' Pistil at heading date 581bp Contig16291 Contig16291 P34893 GO:0003754 chaperone activity Os07g0641700 [Oryza sativa (japonica cultivar-group)] 423 4.25276e-40
BJ271574 whoh26j08 2002 5' Pistil at heading date 609bp Contig16291 Contig16291 Q58455 GO:0016829 lyase activity UDP-D-glucuronate decarboxylase [Hordeum vulgare] 589 2.71267e-59
BJ271658 whoh26p05 2002 5' Pistil at heading date 582bp Contig16291 Contig16291       hypothetical protein Bm1_17870 [Brugia malayi] 231 7.92272e-18
BJ271727 whoh27e04 2002 5' Pistil at heading date 442bp Contig16291 Contig16291 P47901 P47901 P47901 GO:0004930 GO:0007186 GO:0016021 G-protein coupled receptor activity ,  G-protein coupled receptor protein signaling pathway ,  integral to membrane hypothetical protein Bm1_17870 [Brugia malayi] 231 4.56865e-18
BJ271797 whoh27i18 2002 5' Pistil at heading date 578bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome 60s ribosomal protein L21 [Triticum aestivum] 893 1.32564e-94
BJ266999 whoh3d01 2002 5' Pistil at heading date 385bp Contig16291 Contig16291 Q9XH45 GO:0003735 structural constituent of ribosome ribosomal protein S7 [Triticum aestivum] 538 1.17056e-53
BJ267006 whoh3d17 2002 5' Pistil at heading date 390bp Contig16291 Contig16291 Q06548 Q06548 Q06548 Q06548 GO:0004674 GO:0004713 GO:0005524 GO:0016740 protein serine/threonine kinase activity ,  protein-tyrosine kinase activity ,  ATP binding ,  transferase activity rust resistance gene ABC1041 [Hordeum vulgare subsp. vulgare] 670 5.71385e-69
BJ269758 whoh4g23 2002 5' Pistil at heading date 558bp Contig16291 Contig16291 Q63410 Q63410 Q63410 Q63410 GO:0003677 GO:0003677 GO:0005634 GO:0007275 DNA binding ,  DNA binding ,  nucleus ,  development Os06g0232000 [Oryza sativa (japonica cultivar-group)] 397 3.95216e-37
BJ269827 whoh4m12 2002 5' Pistil at heading date 596bp Contig16291 Contig16291 O94360 O94360 GO:0000917 GO:0007067 barrier septum formation ,  mitosis unknown [Zea mays] 569 5.27917e-57
BJ269901 whoh5c11 2002 5' Pistil at heading date 557bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome 60s ribosomal protein L21 [Triticum aestivum] 858 1.38302e-90
BJ270605 whoh8k18 2002 5' Pistil at heading date 615bp Contig16291 Contig16291 P17784 P17784 GO:0006096 GO:0016829 glycolysis ,  lyase activity putative fructose 1-,6-biphosphate aldolase [Triticum aestivum] 958 4.47872e-102
BJ272433 rwhoh11m04 2002 3' Pistil at heading date 552bp Contig16291 Contig16291 Q43292 GO:0003735 structural constituent of ribosome unknown [Zea mays] 439 5.14848e-42
BJ272478 rwhoh12a08 2002 3' Pistil at heading date 534bp Contig16291 Contig16291 Q43292 GO:0003735 structural constituent of ribosome unknown [Zea mays] 439 4.60653e-42
BJ272794 rwhoh13k11 2002 3' Pistil at heading date 695bp Contig16291 Contig16291 Q41764 GO:0003779 actin binding hypothetical protein OsI_013601 [Oryza sativa (indica cultivar-group)] 495 2.87454e-48
BJ273405 rwhoh17b18 2002 3' Pistil at heading date 206bp Contig16291 Contig16291 P55330 P55330 P55330 P55330 GO:0005975 GO:0005975 GO:0016787 GO:0016798 carbohydrate metabolism ,  carbohydrate metabolism ,  hydrolase activity ,  hydrolase activity, acting on glycosyl bonds hypothetical protein OsI_004454 [Oryza sativa (indica cultivar-group)] 113 0.000223038
BJ276471 rwhoh1a07 2002 3' Pistil at heading date 404bp Contig16291 Contig16291 O95755 O95755 O95755 O95755 O95755 GO:0005525 GO:0005794 GO:0006886 GO:0008565 GO:0015031 GTP binding ,  Golgi apparatus ,  intracellular protein transport ,  protein transporter activity ,  protein transport hypothetical protein CHLREDRAFT_155068 [Chlamydomonas reinhardtii] 185 1.00746e-12
BJ276667 rwhoh1n15 2002 3' Pistil at heading date 511bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome 60s ribosomal protein L21 [Triticum aestivum] 645 5.17804e-66
BJ274175 rwhoh21a08 2002 3' Pistil at heading date 647bp Contig16291 Contig16291 P48534 P48534 P48534 GO:0004601 GO:0004601 GO:0016491 peroxidase activity ,  peroxidase activity ,  oxidoreductase activity ascorbate peroxidase [Hordeum vulgare subsp. vulgare] 811 5.60353e-85
BJ274603 rwhoh22o20 2002 3' Pistil at heading date 585bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome 60s ribosomal protein L21 [Triticum aestivum] 753 2.34161e-78
BJ275899 rwhoh23c17 2002 3' Pistil at heading date 559bp Contig16291 Contig16291 P34893 GO:0003754 chaperone activity Os07g0641700 [Oryza sativa (japonica cultivar-group)] 419 1.10613e-39
BJ276302 rwhoh25j08 2002 3' Pistil at heading date 497bp Contig16291 Contig16291 O52325 O52325 GO:0008168 GO:0016740 methyltransferase activity ,  transferase activity UDP-D-glucuronate decarboxylase [Hordeum vulgare] 501 2.41666e-49
BJ276314 rwhoh25k02 2002 3' Pistil at heading date 556bp Contig16291 Contig16291 P34893 GO:0003754 chaperone activity Os07g0641700 [Oryza sativa (japonica cultivar-group)] 423 3.75438e-40
BJ276794 rwhoh26j08 2002 3' Pistil at heading date 512bp Contig16291 Contig16291 Q58455 GO:0016829 lyase activity UDP-D-glucuronate decarboxylase [Hordeum vulgare] 638 3.43259e-65
BJ276874 rwhoh26p05 2002 3' Pistil at heading date 486bp Contig16291 Contig16291 Q9Y2J2 Q9Y2J2 Q9Y2J2 GO:0003779 GO:0005198 GO:0005856 actin binding ,  structural molecule activity ,  cytoskeleton predicted protein [Trichoplax adhaerens] 229 8.01041e-18
BJ276951 rwhoh27e04 2002 3' Pistil at heading date 499bp Contig16291 Contig16291 O95755 O95755 O95755 O95755 O95755 GO:0005525 GO:0005794 GO:0006886 GO:0008565 GO:0015031 GTP binding ,  Golgi apparatus ,  intracellular protein transport ,  protein transporter activity ,  protein transport hypothetical protein Bm1_17870 [Brugia malayi] 201 1.51589e-14
BJ277033 rwhoh27i18 2002 3' Pistil at heading date 595bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome 60s ribosomal protein L21 [Triticum aestivum] 806 1.74119e-84
BJ277118 rwhoh27p05 2002 3' Pistil at heading date 290bp Contig16291 Contig16291 P05176 P05176 P05176 P05176 P05176 P05176 GO:0004497 GO:0005783 GO:0005792 GO:0006118 GO:0016020 GO:0016491 monooxygenase activity ,  endoplasmic reticulum ,  microsome ,  electron transport ,  membrane ,  oxidoreductase activity predicted protein [Trichoplax adhaerens] 189 3.48983e-13
BJ272114 rwhoh3d01 2002 3' Pistil at heading date 390bp Contig16291 Contig16291 Q9ZNS1 GO:0003735 structural constituent of ribosome ribosomal protein S7 [Triticum aestivum] 409 1.05523e-38
BJ272121 rwhoh3d17 2002 3' Pistil at heading date 513bp Contig16291 Contig16291 P46573 P46573 P46573 P46573 GO:0004674 GO:0004713 GO:0005524 GO:0016740 protein serine/threonine kinase activity ,  protein-tyrosine kinase activity ,  ATP binding ,  transferase activity rust resistance gene ABC1041 [Hordeum vulgare subsp. vulgare] 401 1.04074e-37
BJ274793 rwhoh4m12 2002 3' Pistil at heading date 662bp Contig16291 Contig16291       unknown [Zea mays] 375 2.13842e-34
BJ274873 rwhoh5c11 2002 3' Pistil at heading date 702bp Contig16291 Contig16291 Q43291 GO:0003735 structural constituent of ribosome unknown [Zea mays] 457 1.28242e-56
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