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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 60
First Previous 1-60 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whkp_20060_f16f 2012 5' Shoot grown under continuous light 714bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 5.42121e-85
whkp_20060_f16r 2012 3' Shoot grown under continuous light 678bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 4.84831e-85
whkv_12032_a07f 2012 5' Shoot grown with continuous light after cold treatment 219bp Contig6604       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 9.73798e-25
whkv_12032_a07r 2012 3' Shoot grown with continuous light after cold treatment 711bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 5.42121e-85
whkv_6067_m18f 2012 5' Shoot grown with continuous light after cold treatment 628bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 281 1.62594e-73
whkv_6067_m18r 2012 3' Shoot grown with continuous light after cold treatment 582bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 287 1.06917e-75
whrd_3016_a03f 2012 5' Root of dessiccated seed 637bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 4.21489e-85
whrd_3016_a03r 2012 3' Root of dessiccated seed 654bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 273 2.82454e-71
whsc_2071_j18f 2012 5' Shoot grown with cold treatment 726bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 5.63806e-85
whsc_2071_j18r 2012 3' Shoot grown with cold treatment 676bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 273 3.05091e-71
whsc_16021_l06f 2012 5' Shoot grown with cold treatment 603bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 3.63014e-85
whsc_16021_l06r 2012 3' Shoot grown with cold treatment 636bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 302 6.9636e-80
whsl_5062_k04f 2012 5' Seed DPA30 475bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 289 1.89235e-76
whv_1619085_k21f 2012 5' Shoot grown under cold condition for 16days 695bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 281 2.0398e-73
whv_1619085_k21r 2012 3' Shoot grown under cold condition for 16days 631bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 281 1.61815e-73
whv_169082_o24r 2012 3' Shoot grown under cold condition for 16days 89bp Contig6604       PREDICTED:ubiquitin-conjugatingenzymeE22-likeisoform1[Brachypodiumdistachyon] 61 1.43016e-07
whxb_4002_p04f 2012 5' Root 606bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 3.68514e-85
whxb_5002_p04f 2012 5' Root 269bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 191 9.21105e-47
whxb_4002_p04r 2012 3' Root 288bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 107 1.35963e-21
whxc_2094_d23f 2012 5' Root, treated at 50 microM Al for 6h 788bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 6.68964e-85
whxc_2094_d23r 2012 3' Root, treated at 50 microM Al for 6h 611bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 302 6.27013e-80
whxd_27080_b20r 2012 3' Root, treated at 50 microM Al for 6h 636bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 306 3.64447e-81
whxd_15036_n11f 2012 5' Root, treated at 50 microM Al for 6h 461bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 291 4.93585e-77
whxd_15036_n11r 2012 3' Root, treated at 50 microM Al for 6h 644bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 294 1.48971e-77
whxe_37044_f12f 2012 5' Seedling, infected with leaf rust 432bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 264 1.1149e-68
whxe_38044_f12f 2012 5' Seedling, infected with leaf rust 336bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 236 1.8955e-60
whxe_37044_f12r 2012 3' Seedling, infected with leaf rust 657bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 306 4.02809e-81
whxe_38044_f12r 2012 3' Seedling, infected with leaf rust 87bp Contig6604       predictedprotein[Hordeumvulgaresubsp.vulgare] 67 1.53251e-09
whxe_20008_j04f 2012 5' Seedling, infected with leaf rust 606bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 3.68514e-85
whxe_21008_j04f 2012 5' Seedling, infected with leaf rust 283bp Contig6604       predictedprotein[Hordeumvulgaresubsp.vulgare] 196 2.82299e-48
whxe_20008_j04r 2012 3' Seedling, infected with leaf rust 546bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 260 1.959e-67
whxe_21008_j04r 2012 3' Seedling, infected with leaf rust 155bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 106 3.01652e-21
whxe_22008_j04r 2012 3' Seedling, infected with leaf rust 120bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 61 1.44786e-07
whxe_26055_j14r 2012 3' Seedling, infected with leaf rust 613bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 306 3.37289e-81
whxe_6084_m24f 2012 5' Seedling, infected with leaf rust 378bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 86 3.21309e-15
whxe_6084_m24r 2012 3' Seedling, infected with leaf rust 338bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 99 3.60275e-19
whxg_37064_a16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 270bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 152 3.63054e-35
whxg_38064_a16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 429bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 261 7.22658e-68
whxg_37064_a16r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 446bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 150 1.38981e-34
whxg_38064_a16r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 243bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 60 2.4373e-07
whxh_33082_o24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 350bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 73 3.68146e-11
whxh_33082_o24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 318bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 99 3.6987e-19
HX013968 whxj_13057_g13f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 288bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 161 6.07484e-38
HX013984 whxj_13057_g13r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 170bp Contig6604       carbonmonoxidedehydrogenasesmallchain[SinorhizobiumfrediiNGR234] 37 2.21225
HX016175 whxj_17088_j24f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 40bp Contig6604            
HX016190 whxj_17088_j24r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 55bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein,partial[Loliumperenne] 41 0.0654102
HX058303 whxn_25009_g02f 2012 5' Leaves, plant was grown at constant 23℃ 574bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 3.2054e-85
HX058336 whxn_25009_g02r 2012 3' Leaves, plant was grown at constant 23℃ 602bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 294 9.57519e-78
HX129051 whxr_11077_d18f 2012 5' Roots, 18 day old plants were grown hydroponically 758bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 6.23439e-85
HX129075 whxr_11077_d18r 2012 3' Roots, 18 day old plants were grown hydroponically 710bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 316 4.61162e-84
HX130838 whxr_17027_f06f 2012 5' Roots, 18 day old plants were grown hydroponically 782bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 6.58174e-85
HX130861 whxr_17027_f06r 2012 3' Roots, 18 day old plants were grown hydroponically 724bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 5.63806e-85
HX140382 whxr_24004_n03r 2012 3' Roots, 18 day old plants were grown hydroponically 727bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 5.69227e-85
HX171500 whxt_13074_g20f 2012 5' Roots, 18 day old plants were grown hydroponically 684bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 5.01174e-85
HX171525 whxt_13074_g20r 2012 3' Roots, 18 day old plants were grown hydroponically 664bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 4.70753e-85
HX174648 whxt_25039_j09f 2012 5' Roots, 18 day old plants were grown hydroponically 683bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 4.95726e-85
HX174673 whxt_25039_j09r 2012 3' Roots, 18 day old plants were grown hydroponically 657bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 4.59806e-85
HX197374 whxu_10020_m08f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 753bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 6.12596e-85
HX197401 whxu_10020_m08r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 737bp Contig6604       ubiquitin-conjugatingenzymeE2-likeprotein[Loliumperenne] 319 5.8549e-85
whyd_22001_a19r 2012 3' Spikelet at late flowering 66bp Contig6604            
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