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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 42
First Previous 1-42 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsc_19045_c09f 2012 5' Shoot grown with cold treatment 477bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 296 2.6287e-78
whsc_19045_c09r 2012 3' Shoot grown with cold treatment 554bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 4.03853e-79
whxa_27046_c12f 2012 5' Root 711bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 7.29458e-114
whxa_27046_c12r 2012 3' Root 181bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 106 2.25172e-21
whxa_9030_d07r 2012 3' Root 542bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 266 2.10294e-69
whxa_14058_h15f 2012 5' Root 360bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 220 1.08052e-55
whxa_14058_h15r 2012 3' Root 804bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 420 3.78348e-115
whxa_22019_n06f 2012 5' Root 606bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 367 1.54111e-99
whxa_22019_n06r 2012 3' Root 589bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 229 4.73855e-58
whxc_30015_a01f 2012 5' Root, treated at 50 microM Al for 6h 366bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 140 1.40446e-31
whxc_30015_a01r 2012 3' Root, treated at 50 microM Al for 6h 410bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 160 2.26048e-37
whxc_38080_a19f 2012 5' Root, treated at 50 microM Al for 6h 461bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 130 1.9019e-28
whxc_38080_a19r 2012 3' Root, treated at 50 microM Al for 6h 405bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 1.05872e-34
whxc_32077_d17f 2012 5' Root, treated at 50 microM Al for 6h 339bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 4.66189e-51
whxc_32077_d17r 2012 3' Root, treated at 50 microM Al for 6h 316bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 153 2.15835e-35
whxc_32076_f19f 2012 5' Root, treated at 50 microM Al for 6h 323bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 195 4.91607e-48
whxc_32076_f19r 2012 3' Root, treated at 50 microM Al for 6h 462bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 1.04119e-34
whxf_34083_m22f 2012 5' Seedling, infected with leaf rust 572bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 1.01102e-91
HX001820 whxi_13094_c24f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 318bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 199 2.62619e-49
HX001834 whxi_13094_c24r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 354bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 121 6.88422e-26
HX029708 whxk_7002_p04f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 333bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 5.54883e-52
HX029726 whxk_7002_p04r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 397bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 206 2.14949e-51
HX124235 whxq_17050_p16f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 589bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.76356e-97
HX124262 whxq_17050_p16r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 538bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 232 5.50586e-59
HX128819 whxr_4061_d13f 2012 5' Roots, 18 day old plants were grown hydroponically 634bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.60486e-73
HX136627 whxr_11005_k02f 2012 5' Roots, 18 day old plants were grown hydroponically 695bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 320 2.32303e-85
HX138419 whxr_9038_l12r 2012 3' Roots, 18 day old plants were grown hydroponically 660bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 2.97347e-92
HX144486 whxs_1064_a16f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 826bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 9.77676e-114
HX144512 whxs_1064_a16r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 608bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.28413e-73
HX154390 whxs_10088_i24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 742bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 7.47397e-112
HX154416 whxs_10088_i24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 708bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 339 6.5773e-91
HX158097 whxs_2086_l24f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 731bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 1.89531e-112
HX158120 whxs_2086_l24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 608bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.28413e-73
HX182084 whxt_11033_p10r 2012 3' Roots, 18 day old plants were grown hydroponically 732bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 1.89531e-112
HX184664 whxu_19064_b15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 689bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.47063e-92
HX188058 whxu_17044_e12f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 751bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 411 1.54702e-112
HX188080 whxu_17044_e12r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 632bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 279 3.60486e-73
HX193669 whxu_25023_j05r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 674bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 320 2.15186e-85
HX200935 whxu_24018_p08f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 720bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 6.99835e-112
HX200962 whxu_24018_p08r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 710bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 6.00901e-92
whxw_2090_h24f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 441bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 178 6.08202e-43
whxw_2090_h24r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 403bp Contig9476       predictedprotein[Hordeumvulgaresubsp.vulgare] 187 1.33308e-45
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