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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 40
First Previous 1-40 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whsh_10049_a04f 2012 5' - 235bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.23228
whsh_10049_a04r 2012 3' - 227bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.24742
whsh_11033_a15f 2012 5' - 401bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 161 6.02243e-38
whsh_11033_a15r 2012 3' - 383bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 161 5.96983e-38
whsh_6002_b07f 2012 5' - 169bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 114 1.09379e-23
whsh_7050_b10r 2012 3' - 77bp Contig6435            
whsh_2082_b18f 2012 5' - 459bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 160 1.72378e-37
whsh_2082_b18r 2012 3' - 456bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 179 2.74568e-43
whsh_8042_d15f 2012 5' - 183bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.26495
whsh_8042_d15r 2012 3' - 157bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.2475
whsh_14019_e02r 2012 3' - 471bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 222 2.86638e-56
whsh_6067_e05r 2012 3' - 66bp Contig6435            
whsh_5003_e19f 2012 5' - 494bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 202 3.9864e-50
whsh_5003_e19r 2012 3' - 510bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 215 3.49149e-54
whsh_6086_f06f 2012 5' - 504bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.38841e-56
whsh_6084_f06r 2012 3' - 476bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.26571e-56
whsh_4059_g10r 2012 3' - 557bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 316 1.90761e-84
whsh_5094_h06f 2012 5' - 195bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.24302
whsh_5092_h06r 2012 3' - 148bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.26864
whsh_10038_j03f 2012 5' - 251bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.18685
whsh_10038_j03r 2012 3' - 218bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.18454
whsh_12006_j07f 2012 5' - 138bp Contig6435            
whsh_3086_j18r 2012 3' - 488bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 221 8.36903e-56
whsh_13013_k01f 2012 5' - 126bp Contig6435            
whsh_5061_k04f 2012 5' - 201bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.2284
whsh_5061_k04r 2012 3' - 168bp Contig6435       hypotheticalproteinCLOSTMETH_03580[ClostridiummethylpentosumDSM5476] 35 6.43667
whsh_8093_k06r 2012 3' - 195bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.24302
whsh_13078_l05f 2012 5' - 174bp Contig6435       hypotheticalproteinSCHCODRAFT_258494[SchizophyllumcommuneH4-8] 35 8.35298
whsh_18007_m01f 2012 5' - 224bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.25499
whsh_18007_m01r 2012 3' - 179bp Contig6435       hypotheticalproteinCLOSTMETH_03580[ClostridiummethylpentosumDSM5476] 36 4.88128
whsh_11087_m18r 2012 3' - 65bp Contig6435            
whsh_6088_n06r 2012 3' - 47bp Contig6435            
whsh_2063_o04f 2012 5' - 435bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 161 5.94151e-38
whsh_2063_o04r 2012 3' - 443bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 182 4.32893e-44
whsh_5080_o11f 2012 5' - 286bp Contig6435       hypotheticalproteinLOAG_04717[Loaloa] 37 2.25674
whsh_5079_o11r 2012 3' - 285bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 44 0.0104739
whsh_8096_p06r 2012 3' - 518bp Contig6435       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 215 3.66607e-54
whsh_15064_p16f 2012 5' - 74bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 54 1.69813e-05
whsh_2080_p17f 2012 5' - 358bp Contig6435       predictedprotein[Hordeumvulgaresubsp.vulgare] 78 8.66133e-13
whsh_8080_p17r 2012 3' - 418bp Contig6435       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 269 2.69865e-70
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