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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 28
First Previous 1-28 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_9091_e21r 2012 3' Dormant seed with water absorption 569bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 191 9.73289e-47
whv_166019_m05r 2012 3' Shoot grown under cold condition for 16days 685bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 273 4.11892e-71
whxe_11047_a09f 2012 5' Seedling, infected with leaf rust 616bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 236 4.3478e-60
whxe_12047_a09f 2012 5' Seedling, infected with leaf rust 615bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 236 4.28656e-60
whxe_11047_a09r 2012 3' Seedling, infected with leaf rust 504bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 110 2.03326e-22
whxe_12047_a09r 2012 3' Seedling, infected with leaf rust 492bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 110 2.07111e-22
whxf_12077_c18f 2012 5' Seedling, infected with leaf rust 534bp Contig11131       PREDICTED:insulin-likegrowthfactor-bindingproteincomplexacidlabilesubunit-like[Brachypodiumdistachyon] 308 5.91661e-82
whxg_29045_c10r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 575bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 216 2.92618e-54
whxg_38058_h15f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 588bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 187 1.58111e-45
whxg_39058_h15f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 322bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 164 9.29283e-39
whxg_38058_h15r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 545bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 196 2.65998e-48
whxg_6018_o07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 649bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 227 2.99482e-57
whxg_6018_o07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 636bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 252 4.84487e-65
whxh_22010_g04f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 615bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 354 8.26928e-96
whxh_22010_g04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 720bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 299 4.57848e-79
whxh_39010_h04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 558bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 176 3.08108e-42
HX030979 whxl_11031_b06r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 287bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 60 1.90602e-07
HX042357 whxm_5061_d14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 428bp Contig11131       PREDICTED:insulin-likegrowthfactor-bindingproteincomplexacidlabilesubunit-like[Brachypodiumdistachyon] 247 8.30333e-64
HX042358 whxm_6061_d14f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 428bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 246 1.84979e-63
HX042373 whxm_5061_d14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 396bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 116 3.8207e-24
HX042374 whxm_6061_d14r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 476bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 160 1.32578e-37
HX060018 whxn_36026_h07r 2012 3' Leaves, plant was grown at constant 23℃ 728bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 292 5.70548e-77
HX073648 whxo_20014_c04r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 497bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 180 2.10896e-43
HX171784 whxt_12009_h01r 2012 3' Roots, 18 day old plants were grown hydroponically 738bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 302 5.67094e-80
HX177729 whxt_16085_l21r 2012 3' Roots, 18 day old plants were grown hydroponically 783bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 333 5.79968e-89
HX182845 whxu_25015_a01r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 407bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 170 1.67944e-40
whxw_10058_h15r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 743bp Contig11131       OSIGBa0112M24.4[OryzasativaIndicaGroup] 314 1.91834e-83
whxx_10095_b21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 71bp Contig11131            
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