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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 42
First Previous 1-42 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whem_11038_l11f 2012 5' Dormant seed with water absorption 445bp Contig14461       SGT1[Triticumaestivum] 106 2.31142e-21
whem_11038_l11r 2012 3' Dormant seed with water absorption 418bp Contig14461       SGT1[Triticumaestivum] 136 2.09039e-30
whkv_19055_i13r 2012 3' Shoot grown with continuous light after cold treatment 778bp Contig14461       SGT1[Triticumaestivum] 410 3.67248e-112
whrd_14052_n16f 2012 5' Root of dessiccated seed 599bp Contig14461       SGT1-1[Triticumaestivum] 380 1.30674e-103
whsc_3095_b21f 2012 5' Shoot grown with cold treatment 677bp Contig14461       SGT1[Triticumaestivum] 447 1.18041e-123
whsd_12064_b15f 2012 5' Shoot grown with dessication 659bp Contig14461       SGT1-1[Triticumaestivum] 423 1.73113e-116
whsd_6060_e15f 2012 5' Shoot grown with dessication 647bp Contig14461       SGT1-1[Triticumaestivum] 401 1.14441e-109
whsd_6060_e16f 2012 5' Shoot grown with dessication 598bp Contig14461       SGT1-1[Triticumaestivum] 380 1.30674e-103
whsp_4034_p12r 2012 3' 606bp Contig14461       SGT1[Triticumaestivum] 258 1.02327e-66
whvh_1096_b23r 2012 3' Shoot with heat shock treatment 726bp Contig14461       SGT1[Triticumaestivum] 453 1.93385e-125
whvs_1070_l19r 2012 3' Liquid cultured tissue 758bp Contig14461       SGT1[Triticumaestivum] 371 1.38245e-100
whxa_8034_p12f 2012 5' Root 319bp Contig14461       SGT1[Thinopyrumintermedium] 206 2.80584e-51
whxb_3015_a02r 2012 3' Root 489bp Contig14461       SGT1[Triticumaestivum] 177 1.37959e-42
whxc_17075_e17f 2012 5' Root, treated at 50 microM Al for 6h 658bp Contig14461       SGT1[Triticumaestivum] 254 1.37432e-65
whxc_39087_j22f 2012 5' Root, treated at 50 microM Al for 6h 284bp Contig14461       SGT1[Triticumaestivum] 106 2.24436e-21
whxc_25038_k12f 2012 5' Root, treated at 50 microM Al for 6h 485bp Contig14461       SGT1[Triticumaestivum] 239 3.8962e-61
whxc_25038_k12r 2012 3' Root, treated at 50 microM Al for 6h 503bp Contig14461       SGT1[Triticumaestivum] 183 1.44703e-44
whxc_38081_o21r 2012 3' Root, treated at 50 microM Al for 6h 514bp Contig14461       SGT1[Triticumaestivum] 220 1.89763e-55
whxe_20051_n13f 2012 5' Seedling, infected with leaf rust 621bp Contig14461       SGT1-1[Triticumaestivum] 401 8.03417e-110
whxe_21051_n13f 2012 5' Seedling, infected with leaf rust 643bp Contig14461       SGT1-1[Triticumaestivum] 408 9.12779e-112
whxf_7007_j02f 2012 5' Seedling, infected with leaf rust 407bp Contig14461       SGT1-1[Triticumaestivum] 259 3.59038e-67
whxg_24013_d01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 545bp Contig14461       SGT1[Triticumaestivum] 351 4.94718e-95
whxg_25013_d01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 559bp Contig14461       SGT1[Triticumaestivum] 367 9.42358e-100
whxg_26013_d01f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 617bp Contig14461       SGT1[Triticumaestivum] 408 6.3923e-112
whxh_36080_b19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 612bp Contig14461       SGT1[Triticumaestivum] 398 4.99358e-109
whxh_32053_l14r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 633bp Contig14461       SGT1[Triticumaestivum] 271 1.67452e-70
whxh_12085_l21r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 570bp Contig14461       SGT1[Triticumaestivum] 235 4.50018e-60
whxh_25002_o03f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 656bp Contig14461       SGT1-1[Triticumaestivum] 422 4.97684e-116
whxh_39065_o18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 641bp Contig14461       SGT1-1[Triticumaestivum] 408 9.12779e-112
HX014671 whxj_20057_h14f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 299bp Contig14461       SGT1-1[Triticumaestivum] 153 2.78139e-35
HX025377 whxk_4040_i11f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 66bp Contig14461       PREDICTED:proteinSGT1homolog[Brachypodiumdistachyon] 47 0.00145696
HX051030 whxn_8079_a17f 2012 5' Leaves, plant was grown at constant 23℃ 542bp Contig14461       SGT1[Triticumaestivum] 348 7.1776e-94
HX165501 whxt_25096_b24f 2012 5' Roots, 18 day old plants were grown hydroponically 729bp Contig14461       SGT1-1[Triticumaestivum] 479 3.29101e-133
HX167935 whxt_4094_d23f 2012 5' Roots, 18 day old plants were grown hydroponically 709bp Contig14461       SGT1-1[Triticumaestivum] 463 3.05055e-128
HX191592 whxu_17042_h11r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 778bp Contig14461       SGT1[Triticumaestivum] 368 1.22539e-99
HX192237 whxu_20090_h24r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 313bp Contig14461       hypotheticalproteinLOAG_13357[Loaloa] 37 1.28507
whxv_5029_d05r 2012 3' Leaves, plant was grown at constant 23℃ 351bp Contig14461       SGT1[Triticumaestivum] 98 6.24097e-19
whxv_2026_g08f 2012 5' Leaves, plant was grown at constant 23℃ 612bp Contig14461       SGT1[Triticumaestivum] 195 8.38516e-48
whxv_2026_g08r 2012 3' Leaves, plant was grown at constant 23℃ 599bp Contig14461       SGT1[Triticumaestivum] 215 5.56705e-54
whxw_6093_d22f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 768bp Contig14461       SGT1-1[Triticumaestivum] 497 2.20883e-138
whxx_8074_g20f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 763bp Contig14461       SGT1-1[Triticumaestivum] 489 4.58861e-136
whxy_4021_k05f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 682bp Contig14461       SGT1[Triticumaestivum] 455 5.78832e-126
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