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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 17
First Previous 1-17 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whkp_8084_m23f 2012 5' Shoot grown under continuous light 478bp Contig16526       PREDICTED:isocitratedehydrogenase[NAD]regulatorysubunit1,mitochondrial-likeisoform2[Brachypodiumdistachyon] 149 3.0427e-34
whkp_8084_m23r 2012 3' Shoot grown under continuous light 415bp Contig16526       PREDICTED:isocitratedehydrogenase[NAD]regulatorysubunit1,mitochondrial-likeisoform2[Brachypodiumdistachyon] 162 3.45858e-38
whvh_11012_f04f 2012 5' Shoot with heat shock treatment 741bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 365 9.3904e-99
whvh_11012_f04r 2012 3' Shoot with heat shock treatment 261bp Contig16526       OSIGBa0116M22.11[OryzasativaIndicaGroup] 73 2.81894e-11
whvs_17004_n03f 2012 5' Liquid cultured tissue 646bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 6.97515e-91
whvs_17004_n03r 2012 3' Liquid cultured tissue 773bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 342 9.24884e-92
HX059533 whxn_11090_g24f 2012 5' Leaves, plant was grown at constant 23℃ 326bp Contig16526            
HX059561 whxn_11090_g24r 2012 3' Leaves, plant was grown at constant 23℃ 292bp Contig16526            
HX102628 whxp_40083_m22r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 540bp Contig16526       PREDICTED:isocitratedehydrogenase[NAD]regulatorysubunit1,mitochondrial-likeisoform1[Brachypodiumdistachyon] 197 2.04633e-48
HX136413 whxr_22087_j21r 2012 3' Roots, 18 day old plants were grown hydroponically 87bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 59 5.45064e-07
HX163220 whxt_3016_a03f 2012 5' Roots, 18 day old plants were grown hydroponically 780bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 514 1.8058e-143
HX163244 whxt_3016_a03r 2012 3' Roots, 18 day old plants were grown hydroponically 726bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 376 3.00433e-102
HX169548 whxt_27027_f06f 2012 5' Roots, 18 day old plants were grown hydroponically 767bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 475 8.98855e-132
HX169576 whxt_27027_f06r 2012 3' Roots, 18 day old plants were grown hydroponically 734bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 1.47853e-80
HX188504 whxu_11091_e21f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 786bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 480 2.24914e-133
HX188529 whxu_11091_e21r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 738bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 299 4.84519e-79
HX195534 whxu_4069_k18r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 682bp Contig16526       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 3.91878e-90
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