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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 45
First Previous 1-45 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whei_17024_j08r 2012 3' Dormant seed with water absorption after breaking 295bp Contig4790       histoneH4[Zeamays] 146 2.61278e-33
whem_20020_m07f 2012 5' Dormant seed with water absorption 443bp Contig4790       histoneH4[Camelliasinensis] 208 4.31891e-52
whem_20020_m07r 2012 3' Dormant seed with water absorption 437bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.3119e-53
whem_2003_n02r 2012 3' Dormant seed with water absorption 273bp Contig4790       histoneH4[Zeamays] 136 2.05429e-30
whem_5019_n05r 2012 3' Dormant seed with water absorption 433bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.32312e-53
whf_24061_k16f 2012 5' Spike at flowering date 191bp Contig4790       PREDICTED:histoneH4-like[Glycinemax] 122 4.07263e-26
whms_9048_a11f 2012 5' Seed DPA5 of DT3DL CS wheat 465bp Contig4790       histoneH4[Camelliasinensis] 208 4.30229e-52
whms_6079_b17f 2012 5' Seed DPA5 of DT3DL CS wheat 482bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 2.4664e-52
whms_6079_b17r 2012 3' Seed DPA5 of DT3DL CS wheat 449bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33104e-53
whms_6096_b24r 2012 3' Seed DPA5 of DT3DL CS wheat 105bp Contig4790       PREDICTED:uncharacterizedproteinLOC100397108[Callithrixjacchus] 70 1.85501e-10
whms_20038_k11r 2012 3' Seed DPA5 of DT3DL CS wheat 686bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 5.05845e-53
whoh_11086_j06f 2012 5' Pistil at heading date 482bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 2.4664e-52
whoh_11087_j06r 2012 3' Pistil at heading date 395bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.94414e-52
whoh_11070_j17f 2012 5' Pistil at heading date 148bp Contig4790       histoneH4,partial[Eucalyptusglobulus] 99 4.84616e-19
whoh_20062_k16r 2012 3' Pistil at heading date 179bp Contig4790       histoneH4,partial[Eucalyptusglobulus] 117 1.66604e-24
whok_14010_h03r 2012 3' Seed DPA5 478bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.31964e-53
whr_18018_a02r 2012 3' Root 280bp Contig4790       histoneH4[Zeamays] 156 1.90473e-36
whrd_7095_a21f 2012 5' Root of dessiccated seed 467bp Contig4790       histoneH4[Camelliasinensis] 208 4.30229e-52
whrd_7095_a21r 2012 3' Root of dessiccated seed 445bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.34257e-53
whrd_4014_c04f 2012 5' Root of dessiccated seed 461bp Contig4790       histoneH4[Camelliasinensis] 208 4.20762e-52
whrd_4014_c04r 2012 3' Root of dessiccated seed 191bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 98 1.07423e-18
whrd_3062_d16f 2012 5' Root of dessiccated seed 460bp Contig4790       histoneH4[Camelliasinensis] 208 4.20762e-52
whrd_3062_d16r 2012 3' Root of dessiccated seed 439bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.30629e-53
whrd_9038_k11f 2012 5' Root of dessiccated seed 223bp Contig4790       PREDICTED:histoneH4-like[Glycinemax] 148 9.07061e-34
whrd_9038_k11r 2012 3' Root of dessiccated seed 375bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 204 8.12755e-51
whsc_6094_c23f 2012 5' Shoot grown with cold treatment 460bp Contig4790       histoneH4[Camelliasinensis] 208 4.20762e-52
whsc_6094_c23r 2012 3' Shoot grown with cold treatment 434bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.31751e-53
whsc_6094_c24f 2012 5' Shoot grown with cold treatment 270bp Contig4790       histoneH4[Camelliasinensis] 105 5.08956e-21
whsc_6094_c24r 2012 3' Shoot grown with cold treatment 92bp Contig4790       PREDICTED:uncharacterizedproteinLOC100397108[Callithrixjacchus] 63 2.19991e-08
whsc_13026_g07f 2012 5' Shoot grown with cold treatment 198bp Contig4790       hypotheticalproteinPANDA_016906[Ailuropodamelanoleuca] 126 2.14547e-27
whsc_13026_g07r 2012 3' Shoot grown with cold treatment 158bp Contig4790       hypotheticalproteinPANDA_018564[Ailuropodamelanoleuca] 106 2.30242e-21
whsp_6047_a09f 2012 5' 445bp Contig4790       histoneH4[Camelliasinensis] 207 1.63413e-51
whsp_6047_a09r 2012 3' 417bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.94298e-52
whvs_20030_c07f 2012 5' Liquid cultured tissue 67bp Contig4790       PREDICTED:uncharacterizedproteinLOC100397108[Callithrixjacchus] 48 0.000815323
whxb_17007_i02f 2012 5' Root 205bp Contig4790       hypotheticalproteinPANDA_016906[Ailuropodamelanoleuca] 126 2.13144e-27
HX031796 whxl_2061_c13f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 420bp Contig4790       histoneH4[Camelliasinensis] 208 4.3285e-52
HX031808 whxl_2061_c13r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 373bp Contig4790       histoneH4[Zeamays] 201 9.0216e-50
HX105946 whxp_29018_p08f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 459bp Contig4790       histoneH4[Camelliasinensis] 208 4.22617e-52
HX105947 whxp_30018_p08f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 459bp Contig4790       histoneH4[Camelliasinensis] 208 4.22617e-52
HX105975 whxp_29018_p08r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 427bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33434e-53
HX105976 whxp_30018_p08r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 427bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.33434e-53
whyd_12010_d19f 2012 5' Spikelet at late flowering 479bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 2.47757e-52
whyd_12010_d19r 2012 3' Spikelet at late flowering 394bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 210 1.88859e-52
whyd_4008_n19f 2012 5' Spikelet at late flowering 461bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 209 2.46674e-52
whyd_4017_n19r 2012 3' Spikelet at late flowering 356bp Contig4790       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 7.27594e-52
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