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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 36
First Previous 1-36 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_9012_e04r 2012 3' Callus 744bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 1.84946e-94
whdl_13033_a03r 2012 3' Crown of seedling 479bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 191 6.98212e-47
whdl_3026_c20r 2012 3' Crown of seedling 227bp Contig25358       PREDICTED:proteasomesubunitalphatype-3-like[Brachypodiumdistachyon] 39 0.591427
whhg_4002_p04r 2012 3' Anther at meiosis of MT4B CS wheat 770bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 390 2.24847e-106
whoh_6069_f11r 2012 3' Pistil at heading date 521bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.25409e-54
whok_19019_n05r 2012 3' Seed DPA5 795bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 404 1.60671e-110
whok_15049_p14f 2012 5' Seed DPA5 747bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 388 1.06433e-105
whrd_11057_g14r 2012 3' Root of dessiccated seed 650bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 2.35102e-86
whrd_11073_h18r 2012 3' Root of dessiccated seed 629bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 326 2.58384e-87
whrd_19054_k16r 2012 3' Root of dessiccated seed 41bp Contig25358            
whsc_19082_p24r 2012 3' Shoot grown with cold treatment 367bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 129 4.22871e-28
whv_166084_n24r 2012 3' Shoot grown under cold condition for 16days 713bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.17395e-97
whvh_17052_n16r 2012 3' Shoot with heat shock treatment 761bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 399 4.78163e-109
whvs_14004_m03r 2012 3' Liquid cultured tissue 811bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 4.14591e-109
whxa_18073_h18r 2012 3' Root 388bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 3.60112e-27
whxb_29045_c09f 2012 5' Root 154bp Contig25358            
whxb_29045_c09r 2012 3' Root 105bp Contig25358            
whxd_36023_i06r 2012 3' Root, treated at 50 microM Al for 6h 617bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.02767e-85
whxd_21006_k03r 2012 3' Root, treated at 50 microM Al for 6h 645bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 9.33097e-80
whxe_14009_g02r 2012 3' Seedling, infected with leaf rust 616bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 304 1.2817e-80
whxg_40041_g09r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 618bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 309 3.09424e-82
whxh_28076_f19r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 441bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 305 4.4281e-81
whxh_1041_g09r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 625bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 307 1.20893e-81
whxh_15010_h04f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 357bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 110 2.06477e-22
whxh_15010_h04r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 333bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 135 5.96981e-30
whxh_2019_m05r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 654bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 321 1.18121e-85
whxh_3020_n07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 223bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 58 9.45214e-07
HX001757 whxi_17093_c21r 2012 3' Two-week old seedlings（22℃ 16L-8D） 350bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 2.71759e-22
HX002666 whxi_4028_e08r 2012 3' Two-week old seedlings（22℃ 16L-8D） 323bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 81 1.03462e-13
HX085576 whxp_10064_a15r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 810bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 400 4.1145e-109
HX150302 whxs_26059_f14r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 753bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 373 3.57476e-101
HX154700 whxs_5023_j05r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 767bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 6.29738e-93
HX177643 whxt_8070_l19r 2012 3' Roots, 18 day old plants were grown hydroponically 744bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 9.89584e-96
whyd_20059_d10r 2012 3' Spikelet at late flowering 544bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 235 6.74863e-60
whyd_21059_d10r 2012 3' Spikelet at late flowering 488bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 222 3.75669e-56
whyd_19012_h19r 2012 3' Spikelet at late flowering 509bp Contig25358       predictedprotein[Hordeumvulgaresubsp.vulgare] 208 5.60044e-52
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