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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 131
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv3_12015_a01f 2012 5' Shoot grown under cold condition for 3days 643bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.61136e-98
whv3_12015_a01r 2012 3' Shoot grown under cold condition for 3days 574bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 292 4.12375e-77
whv3_4047_a09f 2012 5' Shoot grown under cold condition for 3days 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.79751e-98
whv3_4047_a09r 2012 3' Shoot grown under cold condition for 3days 642bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 9.8203e-90
whv3_10064_a16f 2012 5' Shoot grown under cold condition for 3days 689bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv3_19079_a17f 2012 5' Shoot grown under cold condition for 3days 755bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv3_19079_a17r 2012 3' Shoot grown under cold condition for 3days 640bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 3.68387e-89
whv3_13080_a20f 2012 5' Shoot grown under cold condition for 3days 251bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.115957
whv3_13080_a20r 2012 3' Shoot grown under cold condition for 3days 235bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 36 3.79478
whv3_8096_b24f 2012 5' Shoot grown under cold condition for 3days 418bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 131 1.11517e-28
whv3_8096_b24r 2012 3' Shoot grown under cold condition for 3days 387bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 159 3.85404e-37
whv3_2013_c01f 2012 5' Shoot grown under cold condition for 3days 703bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.19093e-98
whv3_5013_c01f 2012 5' Shoot grown under cold condition for 3days 750bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.66656e-98
whv3_2013_c01r 2012 3' Shoot grown under cold condition for 3days 663bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 348 1.22158e-93
whv3_5013_c01r 2012 3' Shoot grown under cold condition for 3days 676bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.04883e-92
whv3_18045_c09f 2012 5' Shoot grown under cold condition for 3days 563bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 321 6.15377e-86
whv3_17045_c09r 2012 3' Shoot grown under cold condition for 3days 582bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 297 1.03318e-78
whv3_7061_c14f 2012 5' Shoot grown under cold condition for 3days 656bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.74731e-80
whv3_7061_c14r 2012 3' Shoot grown under cold condition for 3days 636bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 326 3.40321e-87
whv3_9094_c24f 2012 5' Shoot grown under cold condition for 3days 734bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.50287e-98
whv3_9094_c24r 2012 3' Shoot grown under cold condition for 3days 653bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.44058e-91
whv3_16014_d04f 2012 5' Shoot grown under cold condition for 3days 771bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv3_2014_d04f 2012 5' Shoot grown under cold condition for 3days 768bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv3_5014_d04f 2012 5' Shoot grown under cold condition for 3days 771bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 185 5.49942e-93
whv3_16014_d04r 2012 3' Shoot grown under cold condition for 3days 665bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.24792e-94
whv3_2014_d04r 2012 3' Shoot grown under cold condition for 3days 696bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.39839e-90
whv3_5014_d04r 2012 3' Shoot grown under cold condition for 3days 708bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 183 8.68257e-92
whv3_11062_d15f 2012 5' Shoot grown under cold condition for 3days 731bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.47014e-98
whv3_11062_d15r 2012 3' Shoot grown under cold condition for 3days 678bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whv3_15028_e08f 2012 5' Shoot grown under cold condition for 3days 695bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv3_15028_e08r 2012 3' Shoot grown under cold condition for 3days 663bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 348 1.22158e-93
whv3_18076_e20f 2012 5' Shoot grown under cold condition for 3days 673bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.89486e-98
whv3_17076_e20r 2012 3' Shoot grown under cold condition for 3days 655bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_9011_f02f 2012 5' Shoot grown under cold condition for 3days 647bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.53958e-80
whv3_9011_f02r 2012 3' Shoot grown under cold condition for 3days 631bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 323 2.18735e-86
whv3_11059_f13f 2012 5' Shoot grown under cold condition for 3days 698bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.15803e-98
whv3_11059_f13r 2012 3' Shoot grown under cold condition for 3days 695bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.27173e-91
whv3_10010_g03f 2012 5' Shoot grown under cold condition for 3days 763bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whv3_8010_g03f 2012 5' Shoot grown under cold condition for 3days 719bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.33919e-98
whv3_10010_g03r 2012 3' Shoot grown under cold condition for 3days 723bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.35917e-97
whv3_8010_g03r 2012 3' Shoot grown under cold condition for 3days 653bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_2026_g07f 2012 5' Shoot grown under cold condition for 3days 617bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.35821e-98
whv3_2026_g07r 2012 3' Shoot grown under cold condition for 3days 653bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.44058e-91
whv3_4041_g09f 2012 5' Shoot grown under cold condition for 3days 755bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv3_4041_g09r 2012 3' Shoot grown under cold condition for 3days 665bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.24792e-94
whv3_11041_g10f 2012 5' Shoot grown under cold condition for 3days 550bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 229 2.95109e-58
whv3_3041_g10f 2012 5' Shoot grown under cold condition for 3days 663bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.80969e-98
whv3_11041_g10r 2012 3' Shoot grown under cold condition for 3days 338bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 235 4.20674e-60
whv3_3041_g10r 2012 3' Shoot grown under cold condition for 3days 615bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 8.57724e-85
whv3_12042_g11f 2012 5' Shoot grown under cold condition for 3days 682bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv3_12042_g11r 2012 3' Shoot grown under cold condition for 3days 565bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 301 1.14452e-79
whv3_13090_g23f 2012 5' Shoot grown under cold condition for 3days 676bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whv3_13090_g23r 2012 3' Shoot grown under cold condition for 3days 647bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.13101e-91
whv3_9026_h08f 2012 5' Shoot grown under cold condition for 3days 655bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.71053e-98
whv3_9026_h08r 2012 3' Shoot grown under cold condition for 3days 704bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 4.666e-89
whv3_16058_h16f 2012 5' Shoot grown under cold condition for 3days 363bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.59226e-12
whv3_16058_h16r 2012 3' Shoot grown under cold condition for 3days 337bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 88 8.33731e-16
whv3_19074_h20f 2012 5' Shoot grown under cold condition for 3days 744bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.60108e-98
whv3_19074_h20r 2012 3' Shoot grown under cold condition for 3days 653bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_14090_h24f 2012 5' Shoot grown under cold condition for 3days 262bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 76 3.32991e-12
whv3_16090_h24f 2012 5' Shoot grown under cold condition for 3days 208bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 75 5.61658e-12
whv3_16090_h24r 2012 3' Shoot grown under cold condition for 3days 149bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 107 1.77954e-21
whv3_7007_i02f 2012 5' Shoot grown under cold condition for 3days 441bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 148 6.9273e-34
whv3_7007_i02r 2012 3' Shoot grown under cold condition for 3days 398bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 168 6.4607e-40
whv3_18008_i03f 2012 5' Shoot grown under cold condition for 3days 692bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_17008_i03r 2012 3' Shoot grown under cold condition for 3days 655bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.79101e-92
whv3_19023_i06f 2012 5' Shoot grown under cold condition for 3days 422bp Contig6477       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 183 2.5329e-44
whv3_19023_i06r 2012 3' Shoot grown under cold condition for 3days 445bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 307 8.92231e-82
whv3_15088_i23f 2012 5' Shoot grown under cold condition for 3days 716bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.34552e-91
whv3_15088_i23r 2012 3' Shoot grown under cold condition for 3days 648bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.13101e-91
whv3_13088_i24f 2012 5' Shoot grown under cold condition for 3days 724bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv3_13088_i24r 2012 3' Shoot grown under cold condition for 3days 646bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.09187e-91
whv3_1023_j05r 2012 3' Shoot grown under cold condition for 3days 512bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 244 1.19723e-62
whv3_19039_j09f 2012 5' Shoot grown under cold condition for 3days 703bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.22382e-98
whv3_19039_j09r 2012 3' Shoot grown under cold condition for 3days 589bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.01068e-92
whv3_16039_j10f 2012 5' Shoot grown under cold condition for 3days 728bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.4374e-98
whv3_16039_j10r 2012 3' Shoot grown under cold condition for 3days 648bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.81853e-97
whv3_2088_j23f 2012 5' Shoot grown under cold condition for 3days 769bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.84422e-98
whv3_2088_j23r 2012 3' Shoot grown under cold condition for 3days 647bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.13101e-91
whv3_20005_k02f 2012 5' Shoot grown under cold condition for 3days 715bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whv3_20005_k02r 2012 3' Shoot grown under cold condition for 3days 650bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.08956e-91
whv3_18037_k10f 2012 5' Shoot grown under cold condition for 3days 528bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 5.77458e-90
whv3_17037_k10r 2012 3' Shoot grown under cold condition for 3days 563bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 299 3.27059e-79
whv3_18038_k11f 2012 5' Shoot grown under cold condition for 3days 686bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.02645e-98
whv3_17038_k11r 2012 3' Shoot grown under cold condition for 3days 687bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 320 2.24967e-85
whv3_18053_k14f 2012 5' Shoot grown under cold condition for 3days 693bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_17053_k14r 2012 3' Shoot grown under cold condition for 3days 630bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.48407e-92
whv3_18054_k16f 2012 5' Shoot grown under cold condition for 3days 693bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv3_17054_k16r 2012 3' Shoot grown under cold condition for 3days 661bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 346 3.51245e-93
whv3_20006_l03f 2012 5' Shoot grown under cold condition for 3days 717bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.30645e-98
whv3_20006_l03r 2012 3' Shoot grown under cold condition for 3days 652bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.08956e-91
whv3_16038_l12f 2012 5' Shoot grown under cold condition for 3days 253bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 39 0.337383
whv3_16038_l12r 2012 3' Shoot grown under cold condition for 3days 228bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 46 0.00482188
whv3_10069_l17f 2012 5' Shoot grown under cold condition for 3days 740bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv3_10069_l17r 2012 3' Shoot grown under cold condition for 3days 657bp Contig6477       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.31884e-92
whv3_3086_l24f 2012 5' Shoot grown under cold condition for 3days 728bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.4374e-98
whv3_3086_l24r 2012 3' Shoot grown under cold condition for 3days 630bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.49107e-98
whv3_2004_m03f 2012 5' Shoot grown under cold condition for 3days 273bp Contig6477       unnamedproteinproduct[TrypanosomacongolenseIL3000] 42 0.0527271
whv3_2004_m03r 2012 3' Shoot grown under cold condition for 3days 249bp Contig6477       PREDICTED:hypotheticalproteinLOC100602241[Nomascusleucogenys] 41 0.115957
whv3_2019_m06f 2012 5' Shoot grown under cold condition for 3days 694bp Contig6477       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
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