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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 102
First Previous 1-100 101-102 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10060_f15f 2012 5' Callus 595bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.90981e-60
whcs_10060_f15r 2012 3' Callus 564bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.71272e-60
whdl_11058_d10r 2012 3' Crown of seedling 484bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.6261e-60
whdl_19038_j21f 2012 5' Crown of seedling 616bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 9.68588e-60
whdl_19038_j21r 2012 3' Crown of seedling 496bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.52421e-60
whdl_2016_p01f 2012 5' Crown of seedling 468bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.58113e-60
whdp_18033_p10f 2012 5' Seed DPA20 527bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 231 6.73189e-59
whh_22088_n12f 2012 5' Spike at heading date 519bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.83941e-60
whh_22088_n12r 2012 3' Spike at heading date 423bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.61659e-60
whhg_14073_g17f 2012 5' Anther at meiosis of MT4B CS wheat 594bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.77274e-60
whkp_12057_h13f 2012 5' Shoot grown under continuous light 580bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.22444e-60
whkp_12057_h13r 2012 3' Shoot grown under continuous light 545bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.74863e-60
whkv_6052_n15r 2012 3' Shoot grown with continuous light after cold treatment 518bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.83941e-60
whkv_18049_o13f 2012 5' Shoot grown with continuous light after cold treatment 80bp Contig10927            
whms_12080_a19f 2012 5' Seed DPA5 of DT3DL CS wheat 575bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 231 8.79008e-59
whms_12080_a19r 2012 3' Seed DPA5 of DT3DL CS wheat 532bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.3655e-60
whms_7088_i23f 2012 5' Seed DPA5 of DT3DL CS wheat 595bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 3.38572e-59
whms_7088_i23r 2012 3' Seed DPA5 of DT3DL CS wheat 557bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 232 3.62272e-59
whms_16006_k03f 2012 5' Seed DPA5 of DT3DL CS wheat 613bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 9.41304e-60
whms_16006_k03r 2012 3' Seed DPA5 of DT3DL CS wheat 577bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.08737e-60
whoh_25041_c15r 2012 3' Pistil at heading date 405bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 226 2.58963e-57
whok_7014_c03f 2012 5' Seed DPA5 584bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.36151e-60
whok_7014_c03r 2012 3' Seed DPA5 542bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.78064e-60
whok_2060_e15f 2012 5' Seed DPA5 587bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.49859e-60
whok_2060_e15r 2012 3' Seed DPA5 567bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.67614e-60
whrd_20011_f02f 2012 5' Root of dessiccated seed 600bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.86735e-60
whrd_20011_f02r 2012 3' Root of dessiccated seed 582bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.22444e-60
whrd_19052_m15f 2012 5' Root of dessiccated seed 581bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.22444e-60
whrd_19052_m15r 2012 3' Root of dessiccated seed 497bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.52421e-60
whsc_11033_p10f 2012 5' Shoot grown with cold treatment 364bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 181 7.23627e-44
whsc_11033_p10r 2012 3' Shoot grown with cold treatment 494bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.54968e-60
whsl_29030_k08r 2012 3' Seed DPA30 53bp Contig10927       60SribosomalproteinL34B[Heveabrasiliensis] 35 4.42719
whvh_7064_a16f 2012 5' Shoot with heat shock treatment 566bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 231 8.52741e-59
whvh_7064_a16r 2012 3' Shoot with heat shock treatment 537bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.64226e-60
whvs_17046_d11f 2012 5' Liquid cultured tissue 598bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.86735e-60
whvs_17046_d11r 2012 3' Liquid cultured tissue 565bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.71272e-60
whvs_4009_g02f 2012 5' Liquid cultured tissue 606bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 9.1402e-60
whvs_4009_g02r 2012 3' Liquid cultured tissue 570bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.67614e-60
whvs_16087_j22f 2012 5' Liquid cultured tissue 597bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.90981e-60
whvs_16087_j22r 2012 3' Liquid cultured tissue 560bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.43727e-60
whxa_6091_e22f 2012 5' Root 321bp Contig10927       PREDICTED:60SribosomalproteinL34-like[Brachypodiumdistachyon] 138 9.34919e-31
whxa_15010_g04f 2012 5' Root 557bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 2.77382e-59
whxa_15010_g04r 2012 3' Root 544bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.74863e-60
whxa_15058_g15f 2012 5' Root 549bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 220 1.34396e-55
whxa_24042_h11f 2012 5' Root 609bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 9.27662e-60
whxa_24042_h11r 2012 3' Root 571bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.81322e-60
whxa_21006_k04f 2012 5' Root 574bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 231 8.79008e-59
whxa_21006_k04r 2012 3' Root 534bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.3655e-60
whxa_22006_k04r 2012 3' Root 209bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 66 4.43559e-09
whxb_22013_c01f 2012 5' Root 205bp Contig10927            
whxb_29077_c17f 2012 5' Root 350bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 94 9.04676e-18
whxb_29077_c17r 2012 3' Root 328bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 126 3.64911e-27
whxb_33013_d01f 2012 5' Root 562bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 2.8785e-59
whxb_33013_d01r 2012 3' Root 528bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.22712e-60
whxb_34023_j06f 2012 5' Root 575bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 231 8.79008e-59
whxb_34023_j06r 2012 3' Root 570bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.67614e-60
whxc_6061_c13f 2012 5' Root, treated at 50 microM Al for 6h 577bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 3.0732e-59
whxc_6061_c13r 2012 3' Root, treated at 50 microM Al for 6h 555bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.16181e-60
whxc_11077_d18f 2012 5' Root, treated at 50 microM Al for 6h 572bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 2.96902e-59
whxc_11077_d18r 2012 3' Root, treated at 50 microM Al for 6h 535bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.50388e-60
whxc_6091_f22r 2012 3' Root, treated at 50 microM Al for 6h 136bp Contig10927       PREDICTED:60SribosomalproteinL34-like[Brachypodiumdistachyon] 59 5.4018e-07
whxc_7091_f22r 2012 3' Root, treated at 50 microM Al for 6h 92bp Contig10927       PREDICTED:60SribosomalproteinL34-like[Brachypodiumdistachyon] 47 0.00213079
whxc_2089_g22f 2012 5' Root, treated at 50 microM Al for 6h 611bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 9.41304e-60
whxc_2089_g22r 2012 3' Root, treated at 50 microM Al for 6h 531bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.22712e-60
whxc_1039_i09f 2012 5' Root, treated at 50 microM Al for 6h 593bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 231 9.6994e-59
whxc_1039_i09r 2012 3' Root, treated at 50 microM Al for 6h 563bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.575e-60
whxc_11007_j01f 2012 5' Root, treated at 50 microM Al for 6h 578bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 3.0732e-59
whxc_12007_j01f 2012 5' Root, treated at 50 microM Al for 6h 577bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 3.0732e-59
whxc_13007_j01f 2012 5' Root, treated at 50 microM Al for 6h 529bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 199 3.78663e-49
whxc_11007_j01r 2012 3' Root, treated at 50 microM Al for 6h 555bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.16181e-60
whxc_12007_j01r 2012 3' Root, treated at 50 microM Al for 6h 534bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 6.3655e-60
whxc_34053_k14r 2012 3' Root, treated at 50 microM Al for 6h 329bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 114 1.42959e-23
whxc_6002_o04f 2012 5' Root, treated at 50 microM Al for 6h 370bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 94 9.10568e-18
whxc_7002_o04f 2012 5' Root, treated at 50 microM Al for 6h 294bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 94 9.05445e-18
whxc_6002_o04r 2012 3' Root, treated at 50 microM Al for 6h 327bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 200 1.16137e-49
whxc_7002_o04r 2012 3' Root, treated at 50 microM Al for 6h 327bp Contig10927       hypotheticalproteinSORBIDRAFT_07g003770[Sorghumbicolor] 196 2.19025e-48
whxd_23025_h05r 2012 3' Root, treated at 50 microM Al for 6h 500bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 5.49873e-60
whxd_31035_m10f 2012 5' Root, treated at 50 microM Al for 6h 567bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 217 1.27425e-54
whxd_31035_m10r 2012 3' Root, treated at 50 microM Al for 6h 555bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 7.29954e-60
whxg_36007_j02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 437bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 226 1.95583e-57
whxg_36007_j02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 470bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 208 5.59409e-52
whxh_21060_e16f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 572bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 233 2.96902e-59
whxh_29001_p01r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 110bp Contig10927       PREDICTED:60SribosomalproteinL34-like[Brachypodiumdistachyon] 56 2.75539e-06
HX004962 whxi_15089_h22r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 196bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 64 1.30766e-08
HX017748 whxj_8036_m11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 259bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 173 2.01554e-41
HX017749 whxj_9036_m11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 243bp Contig10927       PREDICTED:60SribosomalproteinL34-like[Brachypodiumdistachyon] 168 8.2711e-40
HX017761 whxj_8036_m11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 130bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 78 1.13414e-12
HX017762 whxj_9036_m11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 285bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 181 7.16979e-44
HX017777 whxj_8036_m12f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 61bp Contig10927       PREDICTED:60SribosomalproteinL34-like[Brachypodiumdistachyon] 45 0.00624478
HX019978 whxk_16031_a06f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 309bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 207 9.3768e-52
HX019993 whxk_16031_a06r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 218bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 45 0.00802179
HX026061 whxk_1040_j12f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 307bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 204 1.04438e-50
HX026071 whxk_1040_j12r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 238bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 45 0.00816928
HX151417 whxs_14057_g13f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 515bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 197 1.3172e-48
whxw_6036_m11r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 584bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 8.36151e-60
whxy_4038_k12r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 812bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 235 1.76627e-59
whyd_10066_b05r 2012 3' Spikelet at late flowering 173bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 64 1.28982e-08
whyd_1051_e22f 2012 5' Spikelet at late flowering 524bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 195 5.22487e-48
whyd_1051_e22r 2012 3' Spikelet at late flowering 191bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 78 1.15039e-12
whyd_10069_i23f 2012 5' Spikelet at late flowering 369bp Contig10927       hypotheticalproteinSORBIDRAFT_02g024610[Sorghumbicolor] 195 6.46531e-48
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