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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 138
First Previous 1-100 101-138 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whv_167031_a05f 2012 5' Shoot grown under cold condition for 16days 719bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.26889e-97
whv_167031_a05r 2012 3' Shoot grown under cold condition for 16days 673bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.1026e-89
whv_166064_a16f 2012 5' Shoot grown under cold condition for 16days 738bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_169015_b01r 2012 3' Shoot grown under cold condition for 16days 716bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 357 2.36956e-96
whv_165015_b02f 2012 5' Shoot grown under cold condition for 16days 724bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_1615016_b03f 2012 5' Shoot grown under cold condition for 16days 647bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.51342e-97
whv_166016_b03f 2012 5' Shoot grown under cold condition for 16days 717bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.33919e-98
whv_1615016_b03r 2012 3' Shoot grown under cold condition for 16days 653bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.99951e-85
whv_166016_b03r 2012 3' Shoot grown under cold condition for 16days 675bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 344 1.40738e-92
whv_1620031_b05f 2012 5' Shoot grown under cold condition for 16days 653bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 5.67807e-80
whv_1620031_b05r 2012 3' Shoot grown under cold condition for 16days 636bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 326 3.40321e-87
whv_168063_b14r 2012 3' Shoot grown under cold condition for 16days 690bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 339 3.62228e-91
whv_163080_b19f 2012 5' Shoot grown under cold condition for 16days 367bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 83 3.48908e-14
whv_163080_b19r 2012 3' Shoot grown under cold condition for 16days 361bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 107 1.33316e-21
whv_1611062_c16f 2012 5' Shoot grown under cold condition for 16days 709bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.33934e-88
whv_1619062_c16f 2012 5' Shoot grown under cold condition for 16days 691bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.09224e-98
whv_1611062_c16r 2012 3' Shoot grown under cold condition for 16days 680bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.12766e-89
whv_1619062_c16r 2012 3' Shoot grown under cold condition for 16days 654bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 9.99951e-85
whv_1611094_c23f 2012 5' Shoot grown under cold condition for 16days 518bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 341 7.55608e-92
whv_168094_c24f 2012 5' Shoot grown under cold condition for 16days 741bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.94527e-97
whv_168094_c24r 2012 3' Shoot grown under cold condition for 16days 698bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 342 5.76865e-92
whv_1614013_d02f 2012 5' Shoot grown under cold condition for 16days 684bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.99355e-98
whv_1613029_d06f 2012 5' Shoot grown under cold condition for 16days 767bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.81164e-98
whv_1613029_d06r 2012 3' Shoot grown under cold condition for 16days 697bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.37089e-92
whv_1613030_d08f 2012 5' Shoot grown under cold condition for 16days 601bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 251 9.15502e-65
whv_1613030_d08r 2012 3' Shoot grown under cold condition for 16days 586bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 277 1.91872e-72
whv_1612045_d09f 2012 5' Shoot grown under cold condition for 16days 726bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 333 2.88891e-89
whv_1615045_d10f 2012 5' Shoot grown under cold condition for 16days 689bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv_169045_d10f 2012 5' Shoot grown under cold condition for 16days 723bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_1615045_d10r 2012 3' Shoot grown under cold condition for 16days 671bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
whv_169045_d10r 2012 3' Shoot grown under cold condition for 16days 686bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.23286e-92
whv_161046_d11f 2012 5' Shoot grown under cold condition for 16days 738bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_161046_d11r 2012 3' Shoot grown under cold condition for 16days 698bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.42363e-90
whv_1613094_d23f 2012 5' Shoot grown under cold condition for 16days 771bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.87679e-98
whv_1619094_d23f 2012 5' Shoot grown under cold condition for 16days 763bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.77906e-98
whv_1613094_d23r 2012 3' Shoot grown under cold condition for 16days 680bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.12766e-89
whv_1619094_d23r 2012 3' Shoot grown under cold condition for 16days 663bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.15682e-91
whv_1612027_e06r 2012 3' Shoot grown under cold condition for 16days 684bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.14019e-89
whv_1611060_e16f 2012 5' Shoot grown under cold condition for 16days 725bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_1611060_e16r 2012 3' Shoot grown under cold condition for 16days 696bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 4.51268e-97
whv_163091_e22f 2012 5' Shoot grown under cold condition for 16days 790bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 4.03968e-98
whv_163091_e22r 2012 3' Shoot grown under cold condition for 16days 715bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.7399e-91
whv_167027_f06r 2012 3' Shoot grown under cold condition for 16days 689bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.3479e-90
whv_1614059_f13f 2012 5' Shoot grown under cold condition for 16days 730bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.47014e-98
whv_1615059_f13f 2012 5' Shoot grown under cold condition for 16days 646bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.432e-97
whv_1614059_f13r 2012 3' Shoot grown under cold condition for 16days 703bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.81737e-94
whv_1615059_f13r 2012 3' Shoot grown under cold condition for 16days 660bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.02434e-84
whv_1618060_f16r 2012 3' Shoot grown under cold condition for 16days 98bp Contig11259            
whv_166092_f24f 2012 5' Shoot grown under cold condition for 16days 687bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.05934e-98
whv_166092_f24r 2012 3' Shoot grown under cold condition for 16days 647bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 3.69854e-92
whv_1617041_g10f 2012 5' Shoot grown under cold condition for 16days 648bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.59484e-97
whv_1617041_g10r 2012 3' Shoot grown under cold condition for 16days 654bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 314 1.88583e-83
whv_1617042_g11f 2012 5' Shoot grown under cold condition for 16days 113bp Contig11259            
whv_168042_g12f 2012 5' Shoot grown under cold condition for 16days 367bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 84 9.14576e-15
whv_164057_g13f 2012 5' Shoot grown under cold condition for 16days 731bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.49264e-88
whv_164057_g13r 2012 3' Shoot grown under cold condition for 16days 658bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.05757e-89
whv_1616074_g20f 2012 5' Shoot grown under cold condition for 16days 438bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 148 6.74008e-34
whv_1616074_g20r 2012 3' Shoot grown under cold condition for 16days 416bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 162 4.51705e-38
whv_1613010_h03r 2012 3' Shoot grown under cold condition for 16days 675bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 327 2.29906e-87
whv_1613010_h04r 2012 3' Shoot grown under cold condition for 16days 75bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 53 2.89658e-05
whv_1614026_h07f 2012 5' Shoot grown under cold condition for 16days 725bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_1614026_h07r 2012 3' Shoot grown under cold condition for 16days 671bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 5.98142e-88
whv_1611041_h09f 2012 5' Shoot grown under cold condition for 16days 695bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.12513e-98
whv_1611041_h09r 2012 3' Shoot grown under cold condition for 16days 632bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 301 1.51103e-79
whv_1617041_h10f 2012 5' Shoot grown under cold condition for 16days 640bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 6.35058e-97
whv_1617041_h10r 2012 3' Shoot grown under cold condition for 16days 657bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.01215e-84
whv_168057_h13f 2012 5' Shoot grown under cold condition for 16days 692bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 361 1.17505e-97
whv_168057_h13r 2012 3' Shoot grown under cold condition for 16days 661bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.1563e-90
whv_1614073_h18f 2012 5' Shoot grown under cold condition for 16days 741bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.56835e-98
whv_1614073_h18r 2012 3' Shoot grown under cold condition for 16days 661bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 319 3.56252e-85
whv_1616090_h23f 2012 5' Shoot grown under cold condition for 16days 68bp Contig11259            
whv_1610039_i09f 2012 5' Shoot grown under cold condition for 16days 755bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.73203e-98
whv_1610039_i09r 2012 3' Shoot grown under cold condition for 16days 729bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 6.48265e-97
whv_162039_j10f 2012 5' Shoot grown under cold condition for 16days 726bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.40466e-98
whv_162039_j10r 2012 3' Shoot grown under cold condition for 16days 720bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 341 1.04043e-91
whv_164055_j14f 2012 5' Shoot grown under cold condition for 16days 679bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.96065e-98
whv_165055_j14f 2012 5' Shoot grown under cold condition for 16days 55bp Contig11259       ChainS,StructureOfRiceRubiscoInComplexWith6pg 42 0.0362167
whv_164055_j14r 2012 3' Shoot grown under cold condition for 16days 692bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 349 4.62074e-94
whv_1618071_j17f 2012 5' Shoot grown under cold condition for 16days 515bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 356 1.69655e-96
whv_1618071_j17r 2012 3' Shoot grown under cold condition for 16days 672bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 329 5.98142e-88
whv_1618071_j18f 2012 5' Shoot grown under cold condition for 16days 358bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 204 1.04657e-50
whv_1618071_j18r 2012 3' Shoot grown under cold condition for 16days 529bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 239 2.52818e-61
whv_165088_j24f 2012 5' Shoot grown under cold condition for 16days 751bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 3.6993e-98
whv_165088_j24r 2012 3' Shoot grown under cold condition for 16days 673bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 334 1.1026e-89
whv_1616038_k12f 2012 5' Shoot grown under cold condition for 16days 605bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.22535e-98
whv_1616038_k12r 2012 3' Shoot grown under cold condition for 16days 177bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 118 7.47851e-25
whv_163069_k17f 2012 5' Shoot grown under cold condition for 16days 682bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 302 6.20204e-80
whv_163069_k17r 2012 3' Shoot grown under cold condition for 16days 665bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 318 1.04873e-84
whv_1617070_k20r 2012 3' Shoot grown under cold condition for 16days 526bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 259 3.01481e-67
whv_1619006_l03f 2012 5' Shoot grown under cold condition for 16days 739bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.90907e-97
whv_1619006_l03r 2012 3' Shoot grown under cold condition for 16days 660bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 337 2.13093e-90
whv_1615022_l07f 2012 5' Shoot grown under cold condition for 16days 656bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 352 4.84287e-95
whv_1615022_l07r 2012 3' Shoot grown under cold condition for 16days 654bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 315 6.48149e-84
whv_167022_l08f 2012 5' Shoot grown under cold condition for 16days 570bp Contig11259       RecName:Full=Ribulosebisphosphatecarboxylasesmallchainclone512;Short=RuBisCOsmallsubunit 239 3.17213e-61
whv_167022_l08r 2012 3' Shoot grown under cold condition for 16days 522bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 245 4.30026e-63
whv_169053_l13f 2012 5' Shoot grown under cold condition for 16days 712bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 330 2.36297e-88
whv_169053_l13r 2012 3' Shoot grown under cold condition for 16days 668bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.02217e-92
whv_166054_l15f 2012 5' Shoot grown under cold condition for 16days 90bp Contig11259       PREDICTED:ribulosebisphosphatecarboxylasesmallchainPWS4.3,chloroplastic-likeisoform1[Brachypodiumdistachyon] 55 6.00866e-06
whv_168086_l23f 2012 5' Shoot grown under cold condition for 16days 677bp Contig11259       predictedprotein[Hordeumvulgaresubsp.vulgare] 363 2.92776e-98
whv_168086_l23r 2012 3' Shoot grown under cold condition for 16days 670bp Contig11259       ribulose-1,5-bisphosphatecarboxylase/oxygenasesmallsubunit[Triticumaestivum] 343 4.00282e-92
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