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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 316
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whf_6043_g09r 2012 3' Spike at flowering date 58bp Contig6883            
whkp_7013_d01r 2012 3' Shoot grown under continuous light 723bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 430 2.93347e-118
whkp_13025_g06r 2012 3' Shoot grown under continuous light 659bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 329 4.44326e-88
whkp_13073_g17r 2012 3' Shoot grown under continuous light 238bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 81 7.87597e-14
whkp_4089_h22f 2012 5' Shoot grown under continuous light 493bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 7.77994e-46
whkp_4089_h22r 2012 3' Shoot grown under continuous light 451bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 5.78704e-49
whkp_1072_j20r 2012 3' Shoot grown under continuous light 588bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 346 2.00413e-93
whkp_7021_l05r 2012 3' Shoot grown under continuous light 660bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 422 6.57827e-116
whkp_14004_n03r 2012 3' Shoot grown under continuous light 162bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 59 5.48831e-07
whkv_9005_k01r 2012 3' Shoot grown with continuous light after cold treatment 597bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 3.57563e-101
whkv_17021_l06r 2012 3' Shoot grown with continuous light after cold treatment 677bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 402 4.35471e-110
whkv_12069_l18f 2012 5' Shoot grown with continuous light after cold treatment 623bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.86079e-90
whkv_12069_l18r 2012 3' Shoot grown with continuous light after cold treatment 575bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.17432e-95
whms_7095_b21f 2012 5' Seed DPA5 of DT3DL CS wheat 399bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 6.81111e-74
whms_10030_c08r 2012 3' Seed DPA5 of DT3DL CS wheat 624bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 205 6.55867e-51
whsh_2050_b04f 2012 5' - 493bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 9.44439e-68
whsh_2050_b04r 2012 3' - 495bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 273 1.40801e-71
whsh_9074_d05r 2012 3' - 82bp Contig6883            
whsh_9090_d06r 2012 3' - 82bp Contig6883            
whsh_8026_d14r 2012 3' - 60bp Contig6883            
whsh_14067_e17f 2012 5' - 224bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 46 0.00284596
whsh_14067_e17r 2012 3' - 213bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 71 8.05677e-11
whsh_6084_f18r 2012 3' - 50bp Contig6883            
whsh_3059_g04f 2012 5' - 153bp Contig6883            
whsh_3059_g04r 2012 3' - 134bp Contig6883            
whsh_12091_g18f 2012 5' - 246bp Contig6883            
whsh_12091_g18r 2012 3' - 234bp Contig6883       chlorophylla/bbindingprotein,partial[Loliumperenne] 38 0.764621
whsh_6028_h08r 2012 3' - 272bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 122 5.23616e-26
whsh_14012_h19f 2012 5' - 124bp Contig6883            
whsh_7085_i12f 2012 5' - 395bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 162 3.55952e-38
whsh_7085_i12r 2012 3' - 336bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 162 3.46536e-38
whsh_18053_i22f 2012 5' - 188bp Contig6883            
whsh_3006_j07f 2012 5' - 467bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 264 6.60676e-69
whsh_3006_j07r 2012 3' - 423bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 223 2.20866e-56
whsh_16029_k14f 2012 5' - 177bp Contig6883            
whsh_16029_k14r 2012 3' - 183bp Contig6883            
whsh_2046_l21f 2012 5' - 197bp Contig6883            
whsh_2046_l21r 2012 3' - 176bp Contig6883       chlorophylla/bbindingprotein,partial[Loliumperenne] 45 0.00807178
whsh_11008_n01r 2012 3' - 300bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 142 4.90962e-32
whsh_6081_n05f 2012 5' - 227bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 61 1.45336e-07
whsh_6072_n05r 2012 3' - 218bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 71 8.00321e-11
whsh_12040_n15r 2012 3' - 99bp Contig6883            
whsh_13096_p18f 2012 5' - 332bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 127 1.24478e-27
whsh_13096_p18r 2012 3' - 349bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 170 1.30228e-40
whv_1612031_a06r 2012 3' Shoot grown under cold condition for 16days 683bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 6.90127e-95
whv_166095_a21r 2012 3' Shoot grown under cold condition for 16days 659bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 432 4.86724e-119
whv_166063_b14r 2012 3' Shoot grown under cold condition for 16days 708bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 424 1.55465e-116
whv_1618064_b16r 2012 3' Shoot grown under cold condition for 16days 669bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 1.68987e-90
whv_1619096_b23f 2012 5' Shoot grown under cold condition for 16days 682bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 337 2.2974e-90
whv_1619096_b23r 2012 3' Shoot grown under cold condition for 16days 676bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 4.37496e-94
whv_1617030_c07r 2012 3' Shoot grown under cold condition for 16days 713bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 3.49766e-100
whv_1620013_d02f 2012 5' Shoot grown under cold condition for 16days 124bp Contig6883            
whv_1620013_d02r 2012 3' Shoot grown under cold condition for 16days 101bp Contig6883            
whv_1611027_e05f 2012 5' Shoot grown under cold condition for 16days 576bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 5.57476e-77
whv_1610027_e06f 2012 5' Shoot grown under cold condition for 16days 701bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 352 7.35629e-95
whv_166076_e20r 2012 3' Shoot grown under cold condition for 16days 713bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 289 6.00776e-76
whv_1615012_f04f 2012 5' Shoot grown under cold condition for 16days 312bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 217 1.18342e-54
whv_1619007_i02r 2012 3' Shoot grown under cold condition for 16days 584bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 335 5.93693e-90
whv_1620023_i05r 2012 3' Shoot grown under cold condition for 16days 636bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 4.19538e-101
whv_1620023_i06r 2012 3' Shoot grown under cold condition for 16days 371bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 185 6.69055e-45
whv_1617087_i21r 2012 3' Shoot grown under cold condition for 16days 257bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 179 2.81245e-43
whv_161087_i22r 2012 3' Shoot grown under cold condition for 16days 685bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 6.28132e-112
whv_161039_j09r 2012 3' Shoot grown under cold condition for 16days 90bp Contig6883       PREDICTED:chlorophylla-bbindingprotein,chloroplastic-likeisoform1[Brachypodiumdistachyon] 62 4.9154e-08
whv_1615039_j09r 2012 3' Shoot grown under cold condition for 16days 68bp Contig6883            
whv_1617056_j16r 2012 3' Shoot grown under cold condition for 16days 624bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 4.05132e-101
whv_161006_k04f 2012 5' Shoot grown under cold condition for 16days 698bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 446 2.83651e-123
whv_161006_k04r 2012 3' Shoot grown under cold condition for 16days 654bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 383 1.93799e-104
whv_1611086_l23r 2012 3' Shoot grown under cold condition for 16days 590bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 338 5.54579e-91
whv_1617033_o10r 2012 3' Shoot grown under cold condition for 16days 611bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 3.77758e-101
whv_1617081_o21r 2012 3' Shoot grown under cold condition for 16days 133bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 81 7.80614e-14
whv3_4015_a02r 2012 3' Shoot grown under cold condition for 3days 702bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 370 1.99867e-100
whv3_4064_b15r 2012 3' Shoot grown under cold condition for 3days 731bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 3.83668e-97
whv3_6096_b23r 2012 3' Shoot grown under cold condition for 3days 617bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 3.88708e-101
whv3_16011_f01r 2012 3' Shoot grown under cold condition for 3days 662bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 344 1.03413e-92
whv3_18059_f14r 2012 3' Shoot grown under cold condition for 3days 639bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 4.24987e-101
whv3_3023_i05r 2012 3' Shoot grown under cold condition for 3days 610bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 3.77758e-101
whv3_12056_i16r 2012 3' Shoot grown under cold condition for 3days 593bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 368 6.63961e-100
whv3_15006_l04r 2012 3' Shoot grown under cold condition for 3days 624bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 185 1.19805e-44
whv3_1051_n14r 2012 3' Shoot grown under cold condition for 3days 642bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 383 1.86709e-104
whvd_14048_a12f 2012 5' Shoot grown with dessication 703bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 449 4.4217e-124
whvd_14048_a12r 2012 3' Shoot grown with dessication 669bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.74469e-95
whvd_5096_b24r 2012 3' Shoot grown with dessication 523bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 250 1.3686e-64
whvd_6078_c20r 2012 3' Shoot grown with dessication 618bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.64403e-97
whvd_5027_e05f 2012 5' Shoot grown with dessication 472bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 138 7.07782e-31
whvd_5027_e05r 2012 3' Shoot grown with dessication 539bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.21332e-53
whvd_7028_e08r 2012 3' Shoot grown with dessication 386bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 160 2.25945e-37
whvd_1055_i13r 2012 3' Shoot grown with dessication 452bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 260 9.45361e-68
whvd_17055_i14r 2012 3' Shoot grown with dessication 636bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 318 9.26784e-85
whvd_13037_k10r 2012 3' Shoot grown with dessication 301bp Contig6883       PREDICTED:chlorophylla-bbindingprotein2,chloroplastic-likeisoform6[Brachypodiumdistachyon] 155 5.60432e-36
whvd_20003_m01r 2012 3' Shoot grown with dessication 473bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.3654e-66
whvd_12068_m19r 2012 3' Shoot grown with dessication 581bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 1.17391e-98
whvd_3084_m23r 2012 3' Shoot grown with dessication 635bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 393 2.96069e-107
whvd_9020_n08r 2012 3' Shoot grown with dessication 567bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 343 2.00139e-92
whvd_3050_o15r 2012 3' Shoot grown with dessication 581bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 1.17391e-98
whvd_3065_o18r 2012 3' Shoot grown with dessication 643bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 360 2.18267e-97
whvd_11001_p02r 2012 3' Shoot grown with dessication 656bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 7.07466e-54
whvd_15002_p03r 2012 3' Shoot grown with dessication 616bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 3.88708e-101
whvd_18049_p14r 2012 3' Shoot grown with dessication 637bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 372 4.19538e-101
whvh_20061_c14r 2012 3' Shoot with heat shock treatment 694bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 424 1.49184e-116
whvh_16062_c15r 2012 3' Shoot with heat shock treatment 687bp Contig6883       predictedprotein[Hordeumvulgaresubsp.vulgare] 410 2.18233e-112
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