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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 95
First Previous 1-95 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_18015_a01r 2012 3' Callus 418bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 3.67281e-43
whdl_24018_a08f 2012 5' Crown of seedling 248bp Contig20547       ribosomalproteinL11[Triticumaestivum] 140 1.84054e-31
whdl_24018_a08r 2012 3' Crown of seedling 546bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 265 6.21402e-69
whdl_16057_c16r 2012 3' Crown of seedling 497bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 7.48352e-49
whdl_5020_f20f 2012 5' Crown of seedling 429bp Contig20547       ribosomalproteinL11[Triticumaestivum] 279 2.57519e-73
whdl_26044_h09f 2012 5' Crown of seedling 538bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 353 2.18569e-95
whdl_26044_h09r 2012 3' Crown of seedling 592bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 3.26636e-75
whe_4091_g06f 2012 5' Seed DPA10 519bp Contig20547       ribosomalproteinL11[Triticumaestivum] 329 2.97134e-88
whe_4091_g06r 2012 3' Seed DPA10 541bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 1.35993e-76
whe_13087_j12f 2012 5' Seed DPA10 498bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 2.23764e-53
whei_17091_f22r 2012 3' Dormant seed with water absorption after breaking 522bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 294 6.32799e-78
whei_17073_h17r 2012 3' Dormant seed with water absorption after breaking 519bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 1.80683e-77
whei_13002_p03f 2012 5' Dormant seed with water absorption after breaking 432bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 286 2.73974e-75
whei_13002_p03r 2012 3' Dormant seed with water absorption after breaking 545bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 294 7.17693e-78
whem_19041_g09f 2012 5' Dormant seed with water absorption 507bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 338 3.58825e-91
whem_19041_g09r 2012 3' Dormant seed with water absorption 552bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 311 6.0208e-83
whf_3033_a15r 2012 3' Spike at flowering date 409bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 156 2.49926e-36
whh_11039_m03r 2012 3' Spike at heading date 554bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 267 1.30217e-69
whh_11039_m03f 2012 5' Spike at heading date 468bp Contig20547       ribosomalproteinL11[Triticumaestivum] 306 2.58601e-81
whhg_3064_a16f 2012 5' Anther at meiosis of MT4B CS wheat 711bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.78483e-97
whhg_12047_b10f 2012 5' Anther at meiosis of MT4B CS wheat 626bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.0807e-97
whhg_12047_b10r 2012 3' Anther at meiosis of MT4B CS wheat 695bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.64559e-97
whhg_2088_j23r 2012 3' Anther at meiosis of MT4B CS wheat 94bp Contig20547       ribosomalproteinL11[Triticumaestivum] 43 0.0306774
whhg_20066_p20r 2012 3' Anther at meiosis of MT4B CS wheat 47bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 34 6.66321
whms_15069_k17f 2012 5' Seed DPA5 of DT3DL CS wheat 557bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 1.5045e-97
whms_15069_k17r 2012 3' Seed DPA5 of DT3DL CS wheat 545bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 294 7.17693e-78
whms_20033_o09f 2012 5' Seed DPA5 of DT3DL CS wheat 529bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 346 2.50483e-93
whms_20033_o09r 2012 3' Seed DPA5 of DT3DL CS wheat 677bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.4785e-97
whok_2030_c08f 2012 5' Seed DPA5 496bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.31791e-53
whok_2030_c08r 2012 3' Seed DPA5 471bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 227 1.51989e-57
whok_15060_f16f 2012 5' Seed DPA5 731bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.93765e-97
whok_7088_j23f 2012 5' Seed DPA5 696bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.64559e-97
whok_7088_j23r 2012 3' Seed DPA5 713bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.77136e-97
whpc_18032_a07f 2012 5' Anther at meiosis 266bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 54 1.76358e-05
whpc_18032_a07r 2012 3' Anther at meiosis 256bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 88 1.11368e-15
whpc_18032_a08f 2012 5' Anther at meiosis 282bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 66 2.58307e-09
whpc_18032_a08r 2012 3' Anther at meiosis 256bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 88 1.11368e-15
whpc_18080_a19f 2012 5' Anther at meiosis 241bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 41 0.153017
whpc_18080_a19r 2012 3' Anther at meiosis 256bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 88 1.11368e-15
whpc_12024_j07r 2012 3' Anther at meiosis 163bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 108 6.02089e-22
whr_7027_d08f 2012 5' Root 347bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 224 1.29626e-56
whr_7026_d08r 2012 3' Root 513bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 7.9934e-75
whr_7021_f02f 2012 5' Root 302bp Contig20547       ribosomalproteinL11[Triticumaestivum] 181 9.50268e-44
whr_7020_f02r 2012 3' Root 533bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 314 1.07826e-83
whr_11016_p19f 2012 5' Root 431bp Contig20547       ribosomalproteinL11[Triticumaestivum] 279 2.56431e-73
whr_11016_p19r 2012 3' Root 259bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 94 9.11052e-18
whrd_7016_b03r 2012 3' Root of dessiccated seed 569bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 294 8.1633e-78
whsc_19046_c11f 2012 5' Shoot grown with cold treatment 640bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.18267e-97
whsc_19046_c11r 2012 3' Shoot grown with cold treatment 573bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 2.45999e-77
whsc_1089_h21f 2012 5' Shoot grown with cold treatment 569bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 1.58212e-97
whsc_1089_h21r 2012 3' Shoot grown with cold treatment 286bp Contig20547       PREDICTED:60SribosomalproteinL11-like[Brachypodiumdistachyon] 83 3.47059e-14
whsc_19004_m03f 2012 5' Shoot grown with cold treatment 571bp Contig20547       ribosomalproteinL11[Triticumaestivum] 355 5.08951e-96
whsc_19004_m03r 2012 3' Shoot grown with cold treatment 521bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 294 6.18083e-78
whsl_23049_a10f 2012 5' Seed DPA30 403bp Contig20547       ribosomalproteinL11[Triticumaestivum] 264 1.1207e-68
whsl_4090_c06f 2012 5' Seed DPA30 519bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 340 1.28282e-91
whsl_4089_c06r 2012 3' Seed DPA30 536bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 286 2.46003e-75
whsl_20058_c10f 2012 5' Seed DPA30 553bp Contig20547       ribosomalproteinL11[Triticumaestivum] 352 3.01869e-95
whsl_20057_c10r 2012 3' Seed DPA30 381bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 255 3.04986e-66
whsl_5040_m09f 2012 5' Seed DPA30 237bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 161 1.0215e-37
whsl_5039_m09r 2012 3' Seed DPA30 485bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 257 1.05858e-66
whsp_10089_h21f 2012 5' 448bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 298 4.10897e-79
whsp_10089_h21r 2012 3' 686bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 294 1.32194e-77
whsp_2055_i14f 2012 5' 448bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 298 4.10897e-79
whsp_2055_i14r 2012 3' 566bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 1.54687e-76
whxa_1062_c16r 2012 3' Root 632bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.09872e-97
whxa_1026_g08f 2012 5' Root 438bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 174 8.82014e-42
whxa_1026_g08r 2012 3' Root 399bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 188 4.61932e-46
whxa_14073_h18f 2012 5' Root 405bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 267 7.76108e-70
whxa_14073_h18r 2012 3' Root 715bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.79908e-97
whxa_17007_j02r 2012 3' Root 413bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 109 3.48915e-22
whxa_19056_j15f 2012 5' Root 637bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 347 1.88759e-93
whxa_19056_j15r 2012 3' Root 572bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 2.41757e-77
whxa_19056_j16f 2012 5' Root 99bp Contig20547            
whxa_26065_o18f 2012 5' Root 736bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 349 4.04526e-94
whxa_26065_o18r 2012 3' Root 566bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 1.54687e-76
whxb_23088_i23r 2012 3' Root 535bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 1.96962e-77
whxc_24005_l01f 2012 5' Root, treated at 50 microM Al for 6h 401bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.8091e-42
whxc_24005_l01r 2012 3' Root, treated at 50 microM Al for 6h 377bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 199 2.6042e-49
whxc_7005_l02f 2012 5' Root, treated at 50 microM Al for 6h 444bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 166 2.45812e-39
whxc_7005_l02r 2012 3' Root, treated at 50 microM Al for 6h 403bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 179 3.63033e-43
whxc_23001_p02r 2012 3' Root, treated at 50 microM Al for 6h 153bp Contig20547            
whxd_7018_o07r 2012 3' Root, treated at 50 microM Al for 6h 530bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 300 1.57622e-79
HX014404 whxj_9010_h04f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 404bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 267 7.76108e-70
HX014418 whxj_9010_h04r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 423bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 198 7.57682e-49
HX099000 whxp_33022_k07f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 631bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 343 2.65488e-92
HX099029 whxp_33022_k07r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 605bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 1.83316e-76
HX119473 whxq_27037_l09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 647bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 291 9.77827e-77
HX119497 whxq_27037_l09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 583bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 293 2.58723e-77
HX135207 whxr_6087_i21f 2012 5' Roots, 18 day old plants were grown hydroponically 718bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 347 2.47639e-93
HX135234 whxr_6087_i21r 2012 3' Roots, 18 day old plants were grown hydroponically 720bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.8545e-97
HX187815 whxu_26028_e07f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 665bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 340 1.97324e-91
HX187842 whxu_26028_e07r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 631bp Contig20547       ribosomalproteinL11[Triticumaestivum] 360 2.09872e-97
whyd_25050_b04f 2012 5' Spikelet at late flowering 471bp Contig20547       ChainE,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 303 1.27774e-80
whyd_25050_b04r 2012 3' Spikelet at late flowering 536bp Contig20547       predictedprotein[Hordeumvulgaresubsp.vulgare] 277 1.49245e-72
whyd_18024_m02r 2012 3' Spikelet at late flowering 181bp Contig20547            
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