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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 20
First Previous 1-20 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_6032_b08f 2012 5' Seed DPA20 569bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit,partial(chloroplast)[Glyceriafluitans] 394 9.88681e-108
whdp_6032_b08r 2012 3' Seed DPA20 645bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 448 6.17237e-124
whdp_15013_c01f 2012 5' Seed DPA20 472bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 287 9.43376e-76
whdp_15013_c01r 2012 3' Seed DPA20 426bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Castelliatuberculosa] 293 1.31951e-77
whdp_18029_c06f 2012 5' Seed DPA20 168bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 78 8.65916e-13
whdp_18029_c06r 2012 3' Seed DPA20 142bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Castelliatuberculosa] 99 4.68122e-19
whdp_6029_d06r 2012 3' Seed DPA20 48bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Icacinamannii] 36 1.75348
whdp_12028_e07f 2012 5' Seed DPA20 592bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 403 2.39445e-110
whdp_12028_e07r 2012 3' Seed DPA20 618bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 429 2.67943e-118
whdp_4091_e21f 2012 5' Seed DPA20 171bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 80 1.7392e-13
whdp_4091_e21r 2012 3' Seed DPA20 152bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 104 8.80425e-21
whdp_20087_i22f 2012 5' Seed DPA20 572bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 400 1.83398e-109
whdp_20087_i22r 2012 3' Seed DPA20 597bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Crithopsisdelileana] 413 1.82789e-113
whdp_2055_j14r 2012 3' Seed DPA20 610bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Crithopsisdelileana] 424 1.09402e-116
whdp_20087_j22f 2012 5' Seed DPA20 507bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 310 1.37309e-82
whdp_20087_j22r 2012 3' Seed DPA20 471bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Cynosuruscristatus] 325 4.08259e-87
whdp_3067_m17f 2012 5' Seed DPA20 547bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 376 1.87557e-102
whdp_3067_m17r 2012 3' Seed DPA20 572bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Triticumaestivum] 392 2.92799e-107
whdp_13082_p24f 2012 5' Seed DPA20 252bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Deschampsiacespitosa] 133 3.02931e-29
whdp_13082_p24r 2012 3' Seed DPA20 238bp Contig17539       ribulose-1,5-bisphosphatecarboxylase/oxygenaselargesubunit[Castelliatuberculosa] 164 9.20766e-39
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