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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 50
First Previous 1-50 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdp_2072_j19r 2012 3' Seed DPA20 250bp Contig8509       PREDICTED:NADHdehydrogenase[ubiquinone]flavoprotein1,mitochondrial-like[Brachypodiumdistachyon] 163 2.02323e-38
whei_9076_e19f 2012 5' Dormant seed with water absorption after breaking 475bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 312 2.73845e-83
whei_9076_e19r 2012 3' Dormant seed with water absorption after breaking 603bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 294 1.63328e-77
whf_6067_b17f 2012 5' Spike at flowering date 579bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 359 2.17701e-97
whf_6066_b17r 2012 3' Spike at flowering date 539bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 230 1.63605e-58
whhg_9082_p23f 2012 5' Anther at meiosis of MT4B CS wheat 642bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 428 6.60993e-118
whhg_9082_p23r 2012 3' Anther at meiosis of MT4B CS wheat 654bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 2.03468e-93
whr_13074_c05f 2012 5' Root 503bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 353 1.80102e-95
whr_3052_f10f 2012 5' Root 535bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 6.22689e-95
whr_3052_f10r 2012 3' Root 165bp Contig8509            
whrd_3068_m19f 2012 5' Root of dessiccated seed 542bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 4.06624e-97
whrd_3068_m19r 2012 3' Root of dessiccated seed 599bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 1.9663e-75
whsl_15077_h05f 2012 5' Seed DPA30 293bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 152 4.77886e-35
whsl_15076_h05r 2012 3' Seed DPA30 281bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 93 2.57709e-17
whvs_15093_d21f 2012 5' Liquid cultured tissue 655bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 417 1.60099e-114
whvs_15093_d21r 2012 3' Liquid cultured tissue 741bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 408 9.67257e-112
whvs_12018_p07f 2012 5' Liquid cultured tissue 718bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 456 3.78524e-126
whvs_12018_p07r 2012 3' Liquid cultured tissue 731bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 364 2.03439e-98
whxa_27087_j22f 2012 5' Root 424bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 111 7.17122e-23
whxa_27087_j22r 2012 3' Root 378bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 126 2.13673e-27
whxb_5025_g05f 2012 5' Root 571bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 4.23783e-98
whxb_5025_g05r 2012 3' Root 300bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 76 4.32104e-12
whxc_2015_a01f 2012 5' Root, treated at 50 microM Al for 6h 754bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 433 2.9108e-119
whxc_2015_a01r 2012 3' Root, treated at 50 microM Al for 6h 598bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 284 1.27452e-74
whxc_25046_c11r 2012 3' Root, treated at 50 microM Al for 6h 413bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 145 5.73791e-33
whxc_36060_f15f 2012 5' Root, treated at 50 microM Al for 6h 621bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 5.37653e-114
whxc_36060_f15r 2012 3' Root, treated at 50 microM Al for 6h 630bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 290 2.68006e-76
whxc_17035_m10f 2012 5' Root, treated at 50 microM Al for 6h 643bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 444 8.91289e-123
whxc_17035_m10r 2012 3' Root, treated at 50 microM Al for 6h 605bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 6.96601e-76
whxg_16042_g12f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 485bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 155 5.66538e-36
whxg_17042_g12f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 477bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 151 1.04576e-34
whxg_16042_g12r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 446bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 177 1.38659e-42
whxg_17042_g12r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 441bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 175 5.29176e-42
whxg_19009_h02f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 498bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 351 6.90757e-95
whxg_19009_h02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 621bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 288 7.48587e-76
whxg_22009_h02r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 105bp Contig8509       PREDICTED:NADHdehydrogenase[ubiquinone]flavoprotein1,mitochondrial-like[Brachypodiumdistachyon] 81 1.0509e-13
whxh_9059_f13f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 597bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 4.81024e-114
HX011449 whxj_14046_c11f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 413bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 201 8.81135e-50
HX011459 whxj_14046_c11r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 436bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 237 8.48376e-61
HX056044 whxn_24043_e10f 2012 5' Leaves, plant was grown at constant 23℃ 629bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 362 5.54952e-98
HX056076 whxn_24043_e10r 2012 3' Leaves, plant was grown at constant 23℃ 601bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 282 3.76533e-74
HX093823 whxp_5057_g13f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 600bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 234 1.97544e-59
HX093849 whxp_5057_g13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 571bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 259 4.96401e-67
HX093850 whxp_6057_g13r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 245bp Contig8509       PREDICTED:NADHdehydrogenase[ubiquinone]flavoprotein1,mitochondrial-like[Brachypodiumdistachyon] 170 2.17661e-40
HX166590 whxt_29093_c21f 2012 5' Roots, 18 day old plants were grown hydroponically 724bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 503 2.10796e-140
HX166617 whxt_29093_c21r 2012 3' Roots, 18 day old plants were grown hydroponically 772bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 431 1.15918e-118
HX179077 whxt_20084_m24f 2012 5' Roots, 18 day old plants were grown hydroponically 743bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 497 2.08681e-138
HX181120 whxt_17050_o16f 2012 5' Roots, 18 day old plants were grown hydroponically 678bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 434 1.35057e-119
HX181146 whxt_17050_o16r 2012 3' Roots, 18 day old plants were grown hydroponically 700bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 6.88528e-93
HX189442 whxu_1060_f15r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 707bp Contig8509       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 7.02725e-93
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