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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 129
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whca_1082_o23f 2012 5' 622bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.30977e-71
whcs_13011_f02f 2012 5' Callus 694bp Contig3413       HistoneH3[Medicagotruncatula] 268 1.36822e-69
whcs_13011_f02r 2012 3' Callus 713bp Contig3413       HistoneH3[Medicagotruncatula] 272 5.81899e-71
whcs_13059_f13f 2012 5' Callus 321bp Contig3413       HistoneH3[Medicagotruncatula] 66 4.51505e-09
whcs_13059_f13r 2012 3' Callus 595bp Contig3413       HistoneH3[Medicagotruncatula] 271 1.44268e-70
whcs_17019_m05r 2012 3' Callus 723bp Contig3413       HistoneH3[Medicagotruncatula] 272 5.99356e-71
whcs_17019_m06r 2012 3' Callus 256bp Contig3413       putativehistoneH3,partial[Laburnumanagyroides] 164 1.22703e-38
whdl_21010_d13f 2012 5' Crown of seedling 399bp Contig3413       HistoneH3[Medicagotruncatula] 239 3.89239e-61
whdl_21010_d13r 2012 3' Crown of seedling 484bp Contig3413       HistoneH3[Medicagotruncatula] 212 3.90525e-53
whdl_20094_l06f 2012 5' Crown of seedling 426bp Contig3413       HistoneH3[Medicagotruncatula] 227 1.16623e-57
whdl_19094_l06f 2012 5' Crown of seedling 556bp Contig3413       HistoneH3[Medicagotruncatula] 272 3.15897e-71
whdl_19094_l06r 2012 3' Crown of seedling 529bp Contig3413       HistoneH3[Medicagotruncatula] 212 4.32243e-53
whdl_17071_m05r 2012 3' Crown of seedling 261bp Contig3413       HistoneH3[Medicagotruncatula] 66 4.50051e-09
whdl_14080_p11f 2012 5' Crown of seedling 420bp Contig3413       HistoneH3[Medicagotruncatula] 237 8.66515e-61
whdl_14080_p11r 2012 3' Crown of seedling 434bp Contig3413       HistoneH3[Medicagotruncatula] 151 6.1485e-35
whdp_12075_e18f 2012 5' Seed DPA20 615bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.13266e-71
whdp_12075_e18r 2012 3' Seed DPA20 626bp Contig3413       hypotheticalproteinVITISV_010022[Vitisvinifera] 267 1.4054e-69
whdp_1023_i05r 2012 3' Seed DPA20 575bp Contig3413       HistoneH3[Medicagotruncatula] 269 4.96821e-70
whdp_9070_k20f 2012 5' Seed DPA20 618bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.19169e-71
whdp_9070_k20r 2012 3' Seed DPA20 625bp Contig3413       HistoneH3[Medicagotruncatula] 269 6.2233e-70
whe_5009_c01f 2012 5' Seed DPA10 458bp Contig3413       HistoneH3[Medicagotruncatula] 255 5.14223e-66
whe_5009_c01r 2012 3' Seed DPA10 528bp Contig3413       HistoneH3[Medicagotruncatula] 209 3.57784e-52
whe_2067_e11f 2012 5' Seed DPA10 571bp Contig3413       HistoneH3[Medicagotruncatula] 272 3.38128e-71
whe_3067_e11f 2012 5' Seed DPA10 181bp Contig3413       putativehistoneH3,partial[Laburnumanagyroides] 118 9.76724e-25
whe_3067_e11r 2012 3' Seed DPA10 390bp Contig3413       HistoneH3[Medicagotruncatula] 126 3.60112e-27
whe_2067_e11r 2012 3' Seed DPA10 549bp Contig3413       HistoneH3[Medicagotruncatula] 227 1.43589e-57
whe_1072_n23f 2012 5' Seed DPA10 526bp Contig3413       hypotheticalproteinVITISV_010022[Vitisvinifera] 267 8.2838e-70
whe_1072_n23r 2012 3' Seed DPA10 533bp Contig3413       HistoneH3[Medicagotruncatula] 209 3.74047e-52
whem_3078_c20f 2012 5' Dormant seed with water absorption 465bp Contig3413       HistoneH3[Medicagotruncatula] 255 3.08255e-66
whem_3078_c20r 2012 3' Dormant seed with water absorption 559bp Contig3413       hypotheticalproteinVITISV_010022[Vitisvinifera] 267 1.03538e-69
whf_9045_whr_h03r 2012 3' 484bp Contig3413       HistoneH3[Medicagotruncatula] 179 2.80519e-43
whf_9046_whr_k03r 2012 3' 432bp Contig3413       HistoneH3[Medicagotruncatula] 174 8.85785e-42
whf_22072_n11f 2012 5' Spike at flowering date 424bp Contig3413       HistoneH3[Medicagotruncatula] 240 1.73866e-61
whf_22081_n11r 2012 3' Spike at flowering date 525bp Contig3413       HistoneH3[Medicagotruncatula] 215 6.37217e-54
whh_8025_p01f 2012 5' Spike at heading date 557bp Contig3413       HistoneH3[Medicagotruncatula] 272 3.15897e-71
whh_8025_p01r 2012 3' Spike at heading date 388bp Contig3413       HistoneH3[Medicagotruncatula] 128 9.47665e-28
whh_17080_p11f 2012 5' Spike at heading date 569bp Contig3413       HistoneH3[Medicagotruncatula] 272 5.6664e-71
whh_17089_p11r 2012 3' Spike at heading date 409bp Contig3413       HistoneH3[Medicagotruncatula] 177 1.36821e-42
whhg_11021_l05r 2012 3' Anther at meiosis of MT4B CS wheat 691bp Contig3413       HistoneH3[Medicagotruncatula] 272 5.43795e-71
whkv_20083_m22f 2012 5' Shoot grown with continuous light after cold treatment 622bp Contig3413       HistoneH3[Medicagotruncatula] 232 6.36663e-59
whkv_20083_m22r 2012 3' Shoot grown with continuous light after cold treatment 604bp Contig3413       HistoneH3[Medicagotruncatula] 254 1.90143e-65
whkv_20035_n09r 2012 3' Shoot grown with continuous light after cold treatment 469bp Contig3413       HistoneH3[Medicagotruncatula] 254 1.16104e-65
whms_20080_a20f 2012 5' Seed DPA5 of DT3DL CS wheat 282bp Contig3413            
whms_20080_a20r 2012 3' Seed DPA5 of DT3DL CS wheat 228bp Contig3413       Os05g0469900[OryzasativaJaponicaGroup] 37 1.31312
whms_18086_l24f 2012 5' Seed DPA5 of DT3DL CS wheat 726bp Contig3413       HistoneH3[Medicagotruncatula] 272 6.05175e-71
whms_18086_l24r 2012 3' Seed DPA5 of DT3DL CS wheat 721bp Contig3413       HistoneH3[Medicagotruncatula] 57 3.03028e-06
whr_21065_a11f 2012 5' Root 532bp Contig3413       HistoneH3[Medicagotruncatula] 267 8.86174e-70
whr_21065_a11r 2012 3' Root 478bp Contig3413       HistoneH3[Medicagotruncatula] 204 8.00599e-51
whr_21052_f10f 2012 5' Root 492bp Contig3413       HistoneH3[Medicagotruncatula] 269 3.48396e-70
whr_21052_f10r 2012 3' Root 370bp Contig3413       HistoneH3[Medicagotruncatula] 130 1.49743e-28
whr_21011_g13f 2012 5' Root 109bp Contig3413       PREDICTED:histonecluster1,H3f-like[Oryctolaguscuniculus] 68 9.15132e-10
whr_21011_g13r 2012 3' Root 40bp Contig3413            
whr_21012_h13f 2012 5' Root 266bp Contig3413       HistoneH3[Medicagotruncatula] 174 8.95306e-42
whr_21012_h13r 2012 3' Root 232bp Contig3413       HistoneH3[Medicagotruncatula] 70 2.37946e-10
whr_19022_i14r 2012 3' Root 217bp Contig3413       Os05g0469900[OryzasativaJaponicaGroup] 37 1.67265
whr_15015_o19r 2012 3' Root 190bp Contig3413            
whsd_19045_c09f 2012 5' Shoot grown with dessication 667bp Contig3413       HistoneH3[Medicagotruncatula] 272 5.11171e-71
whsd_19045_c09r 2012 3' Shoot grown with dessication 607bp Contig3413       HistoneH3[Medicagotruncatula] 250 2.10228e-64
whsd_19045_c10f 2012 5' Shoot grown with dessication 368bp Contig3413       HistoneH3[Medicagotruncatula] 128 5.52287e-28
whsd_19045_c10r 2012 3' Shoot grown with dessication 176bp Contig3413       histoneH3,partial[Menthasp.MC-2012] 119 3.36775e-25
whsd_12085_k22f 2012 5' Shoot grown with dessication 624bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.36881e-71
whsd_12085_k22r 2012 3' Shoot grown with dessication 612bp Contig3413       hypotheticalproteinVITISV_010022[Vitisvinifera] 267 1.32943e-69
whsl_8082_b24f 2012 5' Seed DPA30 424bp Contig3413       HistoneH3[Medicagotruncatula] 239 2.27076e-61
whsl_8082_b24r 2012 3' Seed DPA30 461bp Contig3413       HistoneH3[Medicagotruncatula] 172 4.36431e-41
whsl_5092_g06f 2012 5' Seed DPA30 583bp Contig3413       HistoneH3[Medicagotruncatula] 272 6.17233e-71
whsl_5091_g06r 2012 3' Seed DPA30 491bp Contig3413       HistoneH3[Medicagotruncatula] 215 5.97037e-54
whsp_4012_e04f 2012 5' 661bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.9942e-71
whsp_4012_e04r 2012 3' 616bp Contig3413       HistoneH3[Medicagotruncatula] 237 2.51302e-60
whvs_7057_g14f 2012 5' Liquid cultured tissue 304bp Contig3413       HistoneH3[Medicagotruncatula] 139 4.126e-31
whvs_7057_g14r 2012 3' Liquid cultured tissue 373bp Contig3413       HistoneH3[Medicagotruncatula] 214 7.85394e-54
whvs_20036_m11f 2012 5' Liquid cultured tissue 617bp Contig3413       HistoneH3[Medicagotruncatula] 271 1.59284e-70
whvs_20036_m11r 2012 3' Liquid cultured tissue 629bp Contig3413       HistoneH3[Medicagotruncatula] 267 2.42964e-69
whxb_31090_h24f 2012 5' Root 312bp Contig3413       HistoneH3[Medicagotruncatula] 57 2.0469e-06
whxb_31090_h24r 2012 3' Root 342bp Contig3413       HistoneH3[Medicagotruncatula] 94 9.11639e-18
whxb_24004_m04r 2012 3' Root 441bp Contig3413       HistoneH3[Medicagotruncatula] 148 5.1607e-34
whxd_36061_c14f 2012 5' Root, treated at 50 microM Al for 6h 585bp Contig3413       HistoneH3[Medicagotruncatula] 215 8.95426e-54
whxd_36061_c14r 2012 3' Root, treated at 50 microM Al for 6h 525bp Contig3413       HistoneH3[Medicagotruncatula] 220 1.51668e-55
whxh_5082_o24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 576bp Contig3413       HistoneH3[Medicagotruncatula] 272 3.49992e-71
whxh_6082_o24f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 450bp Contig3413       HistoneH3[Medicagotruncatula] 253 1.50929e-65
whxh_5082_o24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 577bp Contig3413       hypotheticalproteinVITISV_010022[Vitisvinifera] 267 1.12588e-69
whxh_6082_o24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 436bp Contig3413       HistoneH3[Medicagotruncatula] 191 9.10627e-47
HX016080 whxj_16072_j20r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 331bp Contig3413       HistoneH3[Medicagotruncatula] 75 5.61355e-12
HX040824 whxm_7015_b01f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 429bp Contig3413       HistoneH3[Medicagotruncatula] 245 3.15526e-63
HX062138 whxn_10087_i21f 2012 5' Leaves, plant was grown at constant 23 115bp Contig3413       unknown[Medicagotruncatula] 80 2.31319e-13
HX062165 whxn_10087_i21r 2012 3' Leaves, plant was grown at constant 23 286bp Contig3413       HistoneH3[Medicagotruncatula] 77 1.96785e-12
HX067740 whxn_30084_m24f 2012 5' Leaves, plant was grown at constant 23 628bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.42785e-71
HX067768 whxn_30084_m24r 2012 3' Leaves, plant was grown at constant 23 598bp Contig3413       HistoneH3[Medicagotruncatula] 267 2.10569e-69
HX068150 whxn_28020_n07f 2012 5' Leaves, plant was grown at constant 23 597bp Contig3413       hypotheticalproteinVITISV_010022[Vitisvinifera] 267 1.23447e-69
HX068179 whxn_28020_n07r 2012 3' Leaves, plant was grown at constant 23 638bp Contig3413       HistoneH3[Medicagotruncatula] 269 6.53287e-70
HX069027 whxn_9083_n22f 2012 5' Leaves, plant was grown at constant 23 623bp Contig3413       HistoneH3[Medicagotruncatula] 268 1.06153e-69
HX069059 whxn_9083_n22r 2012 3' Leaves, plant was grown at constant 23 647bp Contig3413       HistoneH3[Medicagotruncatula] 244 1.37079e-62
HX093661 whxp_7041_g10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 648bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.75918e-71
HX093662 whxp_8041_g10f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 676bp Contig3413       HistoneH3[Medicagotruncatula] 272 5.20406e-71
HX093689 whxp_7041_g10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 638bp Contig3413       HistoneH3[Medicagotruncatula] 269 6.53287e-70
HX093690 whxp_8041_g10r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 626bp Contig3413       HistoneH3[Medicagotruncatula] 269 6.30855e-70
HX097266 whxp_36088_i24f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 629bp Contig3413       HistoneH3[Medicagotruncatula] 272 4.42785e-71
HX097295 whxp_36088_i24r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 574bp Contig3413       HistoneH3[Medicagotruncatula] 247 2.02175e-63
HX103339 whxp_5036_n11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 683bp Contig3413       hypotheticalproteinVITISV_010022[Vitisvinifera] 267 1.71171e-69
HX103340 whxp_6036_n11f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 654bp Contig3413       HistoneH3[Medicagotruncatula] 268 1.1867e-69
HX103358 whxp_6036_n11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 668bp Contig3413       HistoneH3[Medicagotruncatula] 268 1.25906e-69
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