National BioResource Project (NBRP)::KOMUGI -Integrated Wheat Science Database- : Genome / Development

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cDNA BLAST Tissue specific clones complex contig list (2012)

Query Form -------------------------- How to use Virtual Display (2012)

-------------------------- Related Sites Download

BLAST

Parameter

	Choose program to use and database to search:
	Program:

Data BaseiPlease choose from list\\>j

Query

Please specify the sequence data to reference.

Enter Sequence

Options for BLAST Search

	Filter		Query Genetic Codes
	Expect		Frame shift penalty for blastx
	Other options:

Options for BLAST Scope

	Sort Hits order by :
	Number of Hits :	All Hits	Limit : Hits
	Number of HSPs :	All HSPs	Limit : HSPs
	Limit results by alignment length :		>
	Limit results by range of query sequence :		-
	Image width :

cDNA / Contigs / ESTs


Triticeae Full-Length cDNA (16,807seq)	fasta.zip
Barley Full-Length cDNA (5,006 seq)	fasta.zip
Wheat EST Contigs Mugest2002 (16,291seq)	download page
Wheat EST Contigs Mugest2003 (2,5428seq)	download page
Wheat EST Contigs version 2012 (37,138seq)	download page
Wheat EST Clones registered : 2012 - (679,211seq)	download page
Wheat EST Clones registered : - 2011 (580,303seq)	download page
Barley EST Clones (134,927 seq)	fasta.zip

ESTs Tissue group (2012 only)


Roots (192,104seq)	fasta.zip
Leaves (100,219seq)	fasta.zip
Seeds (52,835seq)	fasta.zip
Seedlings (176,059seq)	fasta.zip
Others (40,808seq)	fasta.zip
Roots : Barley (8,784 seq)	fasta.zip
Leaves : Barley (73,698 seq)	fasta.zip
Shoots : Barley (52,445 seq)	fasta.zip

ESTs Strain group (2012 only)


Chinese Spring (188,264seq)	fasta.zip
Norin4 (100,219seq)	fasta.zip
Kitakei (49,375seq)	fasta.zip
Valuevskaya (54,696seq)	fasta.zip
Scout66 (45,390seq)	fasta.zip
Atlass66 (39,959seq)	fasta.zip
Chancellor (22,424seq)	fasta.zip
Cranbrook (38,689seq)	fasta.zip
Halberd (38,461seq)	fasta.zip
Others (101,725seq)	fasta.zip

ESTs Treat group (2012 only)


Boric Acid (38,312seq)	fasta.zip
Alminium (46,885seq)	fasta.zip
NaCl (40,060seq)	fasta.zip

ESTs Disease group (2012 only)


Rust (39,928seq)	fasta.zip
Blast (59,019seq)	fasta.zip
PowderyMildew (44,731seq)	fasta.zip

Barley ESTs


[BaRT]Haruna Roots, Germination (8,784 seq)	fasta.zip
[BaSD]Haruna Leaves, Second Leaf Stage (10,482 seq)	fasta.zip
[BaAL]Haruna Leaves, Heading Stage (16,488 seq)	fasta.zip
[BaAK]Akashinriki Leaves, Vegetative Stage (22,645 seq)	fasta.zip
[BaH]H602 Leaves, Heading stage (24,083 seq)	fasta.zip
[BaGS]Haruna Shoots, Germination (18,976 seq)	fasta.zip
[BaET]Haruna Shoots, Seedling (16,171 seq)	fasta.zip
[BaST]Haruna Shoots, Germination (9,502 seq)	fasta.zip
[BaSTL]Haruna Shoots, Germination (7,796 seq)	fasta.zip

Others


ChineseSpring TAC Clones (15seq)	download page
Mugest38kArray (38,839seq)	download page

db not fonund.

db not fonund.

Only sequence or single fasta format is supported.

Query string not found.

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