Japanese | English  
Microarray
Microarray About & Search BLAST Download

Microarray

OutLine of Microarray

NBRP - Wheat is distributing customized DNA Oligo microarrays by Agilent Technologies in 4 x 44K slide format which contains about 38,000 genetic probes. Please contact Kawaura of Yokohama City University at . if you are interested in obtaining the microarrays.

You should use the following accession numbers (platforms) when you submit microarray expression profile data to NCBIfs Gene Expression Omnibus (GEO) (http://www.ncbi.nlm.nih.gov/geo/).

Title GEO accession (Platform)
wheat 38k GPL9805
wheat 22k GPL5343
wheat 11k GPL5344

Please submit each expression data as Samples (GSM) and data from a set of experiment as Series (GSE).

Probe Query Form

Query keyword(s)
Probe name:
(ex. wheat0130)
Homologus Sequence:
(ex. kinase)
 

Publications

wheat 38k

Mizuno N, Hosogi N, Park P, Takumi S.

Hypersensitive response-like reaction is associated with hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii coss. PLoS One. 2010 Jun 25;5(6):e11326.
PubMed PMID: 20593003

Nakamura S, Abe F, Kawahigashi H, Nakazono K, Tagiri A, Matsumoto T, Utsugi S, Ogawa T, Handa H, Ishida H, Mori M, Kawaura K, Ogihara Y, Miura H.

A Wheat Homolog of MOTHER OF FT AND TFL1 Acts in the Regulation of Germination.
Plant Cell. 2011 Sep 6. [Epub ahead of print] PubMed PMID: 21896881

wheat 22k

Kawaura K, Mochida K, Yamazaki Y, Ogihara Y.

Transcriptome analysis of@salinity stress responses in common wheat using a 22k oligo-DNA microarray. Funct Integr Genomics. 2006 Apr;6(2):132-42. PubMed PMID: 16328439.

wheat 11k & wheat 22k

Kawaura K, Mochida K, Ogihara Y.

Genome-wide analysis for identification of salt-responsive genes in common wheat.
Funct Integr Genomics. 2008 Aug;8(3):277-86. PubMed PMID: 18320247.

page-top