Strains - Wild Strains - Wild Core Collection - Detail

Detail of Wild Core Collection

Basic information
Acc. No. W1236
Core collection rank 2
Biological information
Species O. rufipogon
Old Species Name O. perennis
Genome AA
SINE code AA110000
Remarks Perennial
Evaluation of bacterial blight resistance reaction
( Results List )
bacterial leaf blight T7174(Reaction) M
bacterial leaf blight T7133 (Reaction) R
DNA Marker DNA Marker data
DRA Acc. No. -
Phenotype
Anther length(mm) 5.3
Apiculus color Purple
Awn length(mm) 69.6
Grain weight of 20 0.36
Heading date 2001.8.5-8.16
Hull color Black-White
Panicle length 19.1
Panicle type 4.2
Pericarp color Red
Plant height 144.2
Presence or absence of awn Presence
Seed fertility 30.5
Shedding degree index 1.8
Stigma color Purple
Stem No. 39.8
Fiscal year 2001
Phenotype image
History
Original place Madang, Australian New Guinea (Papua New Guinea)
Acquired from J.R. Vicary
Year acquired(*Year registered) * 1961/6/30
Preservation
Preservation form SELFING
Seed stock volume less than 100
Year multiplied 1 1977
Year multiplied 2 1986
Reference    >> Please submit your publication.
Kubo T, Takashi T, Ashikari M, Yoshimura A, Kurata N.
Mol Plant  2016 9(2)   221-232  
Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice.
[PubMed ID = 26455463
Kobayashi H.
The Bulletin of Okayama University of Science  2015 51A   53-56  
A study of the relationship between wild rice (Oryza rufipogon) and japonica rice varieties (Oryza sativa L.)
Yin H, Akimoto M, Kaewcheenchai R, Sotowa M, Ishii T, Ishikawa R.
Genes Genet Syst  2015 90(5)   269-81  
Inconsistent diversities between nuclear and plastid genomes of AA genome species in the genus Oryza.
[PubMed ID = 26687860
Ishimaru K, Hirotsu N, Madoka Y, Murakami N, Hara N, Onodera H, Kashiwagi T, Ujiie K, Shimizu B, Onishi A, Miyagawa H, Katoh E.
Nat Genet  2013 45(6)   707-11  
Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield.
[PubMed ID = 23583977
Yamaki S, Ohyanagi H, Yamasaki M, Eiguchi M, Miyabayashi T, Kubo T, Kurata N, Nonomura K.
Breed Sci  2013 63(3)   246-54  
Development of INDEL markers to discriminate all genome types rapidly in the genus Oryza.
[PubMed ID = 24273419
Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B.
Nature  2012 490(7421)   497-501  
A map of rice genome variation reveals the origin of cultivated rice.
[PubMed ID = 23034647
Mizuta Y, Harushima Y, Kurata N.
Proc Natl Acad Sci U S A  2010 107(47)   20417-22  
Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes.
[PubMed ID = 21048083
Yamaki S, Miyabayashi T, Eiguchi M, Kitano H, Nonomura K.I., Kurata N.
Breed Sci.  2010 60(5)   586-596  
Diversity of panicle branching patterns in wild relatives of rice.
Suzaki T, Ohneda M, Toriba T, Yoshida A, Hirano HY.
PLoS Genet  2009 5(10)   e1000693  
FON2 SPARE1 redundantly regulates floral meristem maintenance with FLORAL ORGAN NUMBER2 in rice.
[PubMed ID = 19834537
Xu JH, Kurata N, Akimoto M, Ohtsubo H, Ohtsubo E.
Genes Genet Syst  2005 80(2)   129-34  
Identification and characterization of Australian wild rice strains of Oryza meridionalis and Oryza rufipogon by SINE insertion polymorphism.
[PubMed ID = 16172525
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