Strains - Wild Strains - Wild Core Collection - Detail

Detail of Wild Core Collection

Basic information
Acc. No. W0017
Core collection rank 1
Biological information
Species O. alta
Genome CCDD
Remarks Perennial
IRIS(IRRI)
IRGC100888 IRGC100111
Evaluation of bacterial blight resistance reaction
( Results List ) 		bacterial leaf blight T7174(Reaction) MR
bacterial leaf blight T7133 (Reaction) S
DNA Marker DNA Marker data
DRA Acc. No. DRA004525
Phenotype
Anther length(mm) 2.86
Apiculus color Green
Awn length(mm) 46.6
Grain weight of 20 0.31
Heading date 8/5-8/11
Hull color Black
Panicle type 3
Pericarp color Red
Plant height 205
Presence or absence of awn Presence
Seed fertility 49.6
Shedding degree index 1.8
Spikelet No. 279.7
Stigma color White
Stem No. 14
Fiscal year 2000
Phenotype image
History
Original place Surinam
Acquired from 1) CRRI, Cuttack, Orissa, India
2) H.I. Oka
Year acquired(*Year registered) * 1958/4/1
Preservation
Preservation form SELFING,VEGETATIVELY
Seed stock volume more than 1000
Year multiplied 1 1998
Year multiplied 2 2000
Reference    >> Please submit your publication.
Kawai K, Takehara S, Kashio T, Morii M, Sugihara A, Yoshimura H, Ito A, Hattori M, Toda Y, Kojima M, Takebayashi Y, Furuumi H, Nonomura KI, Mikami B, Akagi T, Sakakibara H, Kitano H, Matsuoka M, Ueguchi-Tanaka M.
Commun Biol  2022 5(1)   67  
Evolutionary alterations in gene expression and enzymatic activities of gibberellin 3-oxidase 1 in Oryza.
[PubMed ID = 35046494] 
Yamaki S, Ohyanagi H, Yamasaki M, Eiguchi M, Miyabayashi T, Kubo T, Kurata N, Nonomura K.
Breed Sci  2013 63(3)   246-54  
Development of INDEL markers to discriminate all genome types rapidly in the genus Oryza.
[PubMed ID = 24273419] 
Nosaka M, Itoh J, Nagato Y, Ono A, Ishiwata A, Sato Y.
PLoS Genet  2012 8(9)   e1002953  
Role of transposon-derived small RNAs in the interplay between genomes and parasitic DNA in rice.
[PubMed ID = 23028360] 
Honma Y, Yoshida Y, Terachi T, Toriyama K, Mikami T, Kubo T.
Curr Genet  2011 57(4)   261-70  
Polymorphic minisatellites in the mitochondrial DNAs of Oryza and Brassica.
[PubMed ID = 21562713] 
Yamaki S, Miyabayashi T, Eiguchi M, Kitano H, Nonomura K.I., Kurata N.
Breed Sci.  2010 60(5)   586-596  
Diversity of panicle branching patterns in wild relatives of rice.
Wu J, Fujisawa M, Tian Z, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, Kanamori H, Namiki N, Mizuno H, Ma J, Sasaki T, Matsumoto T.
Plant J  2009 60(5)   805-19  
Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure.
[PubMed ID = 19702669] 
Khan N, Katsube-Tanaka T, Iida S, Yamaguchi T, Nakano J, Tsujimoto H.
J Agric Food Chem  2008 56(13)   4955-61  
Identification and variation of glutelin alpha polypeptides in the genus Oryza assessed by two-dimensional electrophoresis and step-by-step immunodetection.
[PubMed ID = 18553883] 
Khan N, Katsube-Tanaka T, Iida S, Yamaguchi T, Nakano J, Tsujimoto H.
Electrophoresis  2008 29(6)   1308-16  
Diversity of rice glutelin polypeptides in wild species assessed by the higher-temperature sodium dodecyl sulfate-polyacrylamide gel electrophoresis and subunit-specific antibodies.
[PubMed ID = 18288782] 
Kato H, Tezuka K, Feng YY, Kawamoto T, Takahashi H, Mori K, Akagi H.
Heredity (Edinb)  2007 99(5)   516-24  
Structural diversity and evolution of the Rf-1 locus in the genus Oryza.
[PubMed ID = 17622268] 
Xu JH, Osawa I, Tsuchimoto S, Ohtsubo E, Ohtsubo H.
Genes Genet Syst  2005 80(3)   161-71  
Two new SINE elements, p-SINE2 and p-SINE3, from rice.
[PubMed ID = 16172529] 
H.I. Oka
1957
Report of study-tour to India for collection of rice, 1957
Request

Users except Japan can not request any "plant body" resources.
Users can not request more than 20 strains provided by the National Institute of Genetics (Genetic Resource Center)within the year. Please contact us if you wish to request more than (Contact: hfuruumi [at] nig.ac.jp).

Please contact us if you wish to request for other form of strains: other than seed, plant body and DNA.
Seed
Plant Body
DNA
/rice/oryzabase