Strains - Wild Strains - Wild Core Collection - Detail

Detail of Wild Core Collection

Basic information
Acc. No. W0008
Core collection rank 1
Biological information
Species O. australiensis
Genome EE
Remarks Perennial
Search IRIS(IRRI) IRIS(IRRI)
IRGC100882 IRGC100113
Evaluation of bacterial blight resistance reaction
( Results List )
bacterial leaf blight T7174(Reaction) S
bacterial leaf blight T7133 (Reaction) S
DNA Marker DNA Marker data
DRA Acc. No. DRA004524
Phenotype
Anther length(mm) 3.65
Apiculus color Green
Awn length(mm) 50
Grain weight of 20 0.29
Heading date 7/31-8/1
Hull color Black
Panicle type 3
Pericarp color Red
Plant height 136
Presence or absence of awn Presence
Seed fertility 40.1
Shedding degree index 1.6
Spikelet No. 350.1
Stigma color White
Stem No. 9
Fiscal year 2000
Phenotype image
History
Original place Australia(?)
Acquired from 1) CRRI, Cuttack, Orissa, India
2) H.I. Oka
Year acquired(*Year registered) * 1958/4/1
Preservation
Preservation form SELFING
Seed stock volume more than 1000
Year multiplied 1 1996
Year multiplied 2 2000
Reference    >> Please submit your publication.
Shenton M, Iwamoto C, Kurata N, Ikeo K.
Rice (N Y)  2016 9(1)   42  
Effect of Wild and Cultivated Rice Genotypes on Rhizosphere Bacterial Community Composition.
[PubMed ID = 27557607
Yi C, Zhang W, Dai X, Li X, Gong Z, Zhou Y, Liang G, Gu M.
Chromosome Res.  2013 21(8)   725-37  
Identification and diversity of functional centromere satellites in the wild rice species Oryza brachyantha.
[PubMed ID = 24077888
Mitani-Ueno N, Ogai H, Yamaji N, Ma JF.
Physiol Plant  2013 151(3)   200-7  
Physiological and molecular characterization of Si uptake in wild rice species.
[PubMed ID = 24320720
Yamaki S, Ohyanagi H, Yamasaki M, Eiguchi M, Miyabayashi T, Kubo T, Kurata N, Nonomura K.
Breed. Sci.  2013 63(3)   246-54  
Development of INDEL markers to discriminate all genome types rapidly in the genus Oryza.
[PubMed ID = 24273419
Nosaka M, Itoh J, Nagato Y, Ono A, Ishiwata A, Sato Y.
PLoS Genet.  2012 8(9)   e1002953  
Role of transposon-derived small RNAs in the interplay between genomes and parasitic DNA in rice.
[PubMed ID = 23028360
Ishikawa R, Ohnishi T, Kinoshita Y, Eiguchi M, Kurata N, Kinoshita T.
Plant J.  2011 65(5)   798-806  
Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division.
[PubMed ID = 21251103
Yamaki S, Miyabayashi T, Eiguchi M, Kitano H, Nonomura K.I., Kurata N.
Breed Sci.  2010 60(5)   586-596  
Diversity of panicle branching patterns in wild relatives of rice.
Wu J, Fujisawa M, Tian Z, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, Kanamori H, Namiki N, Mizuno H, Ma J, Sasaki T, Matsumoto T.
Plant J.  2009 60(5)   805-19  
Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure.
[PubMed ID = 19702669
Yamane H, Ito T, Ishikubo H, Fujisawa M, Yamagata H, Kamiya K, Ito Y, Hamada M, Kanamori H, Ikawa H, Katayose Y, Wu J, Sasaki T, Matsumoto T.
RICE  2008
Molecular and Evolutionary Analysis of the Hd6 Photoperiod Sensitivity Gene Within Genus Oryza.
Chung MC, Lee YI, Cheng YY, Chou YJ, Lu CF.
Theor. Appl. Genet.  2008 116(6)   745-53  
Chromosomal polymorphism of ribosomal genes in the genus Oryza.
[PubMed ID = 18214422
Khan N, Katsube-Tanaka T, Iida S, Yamaguchi T, Nakano J, Tsujimoto H.
Electrophoresis  2008 29(6)   1308-16  
Diversity of rice glutelin polypeptides in wild species assessed by the higher-temperature sodium dodecyl sulfate-polyacrylamide gel electrophoresis and subunit-specific antibodies.
[PubMed ID = 18288782
Takahashi H, Sato YI, Nakamura I.
Breed Sci.  2008 58   225-233  
Evolutionary analysis of two plastid DNA sequences in cultivated and wild species of Oryza
Ammiraju JS, Luo M, Goicoechea JL, Wang W, Kudrna D, Mueller C, Talag J, Kim H, Sisneros NB, Blackmon B, Fang E, Tomkins JB, Brar D, MacKill D, McCouch S, Kurata N, Lambert G, Galbraith DW, Arumuganathan K, Rao K, Walling JG, Gill N, Yu Y, SanMiguel P, Soderlund C, Jackson S, Wing RA.
Genome Res.  2005 16(1)   140-7  
The Oryza bacterial artificial chromosome library resource: construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza.
[PubMed ID = 16344555
Xu JH, Osawa I, Tsuchimoto S, Ohtsubo E, Ohtsubo H.
Genes Genet. Syst.  2005 80(3)   161-71  
Two new SINE elements, p-SINE2 and p-SINE3, from rice.
[PubMed ID = 16172529
H.I. Oka
1957
Report of study-tour to India for collection of rice, 1957
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