Strains - Wild Strains - Wild Core Collection - Detail

Detail of Wild Core Collection

Basic information
Acc. No. W1981
Core collection rank 3
Biological information
Species O. rufipogon
Old Species Name O. perennis
Genome AA
SINE code AA110000
Evaluation of bacterial blight resistance reaction
( Results List )
bacterial leaf blight T7174(Reaction) M or S
bacterial leaf blight T7133 (Reaction) M
DNA Marker DNA Marker data
DRA Acc. No. -
Phenotype
Fiscal year 2000
History
Original place near Palembang, Indonesia
Acquired from M. Ihara & L. Gadrinab
Year acquired(*Year registered) * 1985/4
Preservation
Preservation form SELFING,VEGETATIVELY
Seed stock volume less than 100
Reference    >> Please submit your publication.
Yin H, Akimoto M, Kaewcheenchai R, Sotowa M, Ishii T, Ishikawa R.
Genes Genet Syst  2015 90(5)   269-81  
Inconsistent diversities between nuclear and plastid genomes of AA genome species in the genus Oryza.
[PubMed ID = 26687860
Ogiso-Tanaka E, Matsubara K, Yamamoto S, Nonoue Y, Wu J, Fujisawa H, Ishikubo H, Tanaka T, Ando T, Matsumoto T, Yano M.
PLoS One  2013 8(10)   e75959  
Natural variation of the RICE FLOWERING LOCUS T 1 contributes to flowering time divergence in rice.
[PubMed ID = 24098411
Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B.
Nature  2012 490(7421)   497-501  
A map of rice genome variation reveals the origin of cultivated rice.
[PubMed ID = 23034647
Asano K, Yamasaki M, Takuno S, Miura K, Katagiri S, Ito T, Doi K, Wu J, Ebana K, Matsumoto T, Innan H, Kitano H, Ashikari M, Matsuoka M.
Proc Natl Acad Sci U S A  2011 108(27)   11034-9  
Artificial selection for a green revolution gene during japonica rice domestication.
[PubMed ID = 21646530
Wu J, Fujisawa M, Tian Z, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, Kanamori H, Namiki N, Mizuno H, Ma J, Sasaki T, Matsumoto T.
Plant J  2009 60(5)   805-19  
Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure.
[PubMed ID = 19702669
Xu JH, Cheng C, Tsuchimoto S, Ohtsubo H, Ohtsubo E.
Genes Genet Syst  2007 82(3)   217-29  
Phylogenetic analysis of Oryza rufipogon strains and their relations to Oryza sativa strains by insertion polymorphism of rice SINEs.
[PubMed ID = 17660692
Cai HW, Wang XK, Morishima H.
Heredity (Edinb)  2004 92(5)   409-17  
Comparison of population genetic structures of common wild rice (Oryza rufipogon Griff.), as revealed by analyses of quantitative traits, allozymes, and RFLPs.
[PubMed ID = 14997180
Request
Users except Japan can not request any plant body resources.
Please contact us if you wish to request for other form of strains: other than seed, plant body and DNA.
Seed
Plant Body
DNA
/rice/oryzabase