Strains - Wild Strains - Wild Core Collection - Detail

Detail of Wild Core Collection

Basic information
Acc. No. W1681
Core collection rank 3
Biological information
Species O. rufipogon
Old Species Name O. perennis
Genome AA
SINE code AA110000
Search IRIS(IRRI) IRIS(IRRI)
IRGC105625
Evaluation of bacterial blight resistance reaction
( Results List )
bacterial leaf blight T7174(Reaction) S
bacterial leaf blight T7133 (Reaction) S
DNA Marker DNA Marker data
DRA Acc. No. DRA005599
Phenotype
Fiscal year 2000
History
Original place 20.09 N, 84.45 E, Orissa, India
Acquired from H.I. Oka & group
Year acquired(*Year registered) * 1979/12/25
Preservation
Preservation form SELFING
Seed stock volume more than 1000
Year multiplied 1 1980
Year multiplied 2 1981
Reference    >> Please submit your publication.
Kubo T, Takashi T, Ashikari M, Yoshimura A, Kurata N.
Mol Plant  2016 9(2)   221-232  
Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice.
[PubMed ID = 26455463
Niihama M, Mochizuki M, Kurata N, Nonomura K.
Breed Sci  2015 65(4)   357-61  
PCR-based INDEL markers co-dominant between Oryza sativa, japonica cultivars and closely-related wild Oryza species.
[PubMed ID = 26366120
Yin H, Akimoto M, Kaewcheenchai R, Sotowa M, Ishii T, Ishikawa R.
Genes Genet Syst  2015 90(5)   269-81  
Inconsistent diversities between nuclear and plastid genomes of AA genome species in the genus Oryza.
[PubMed ID = 26687860
Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B.
Nature  2012 490(7421)   497-501  
A map of rice genome variation reveals the origin of cultivated rice.
[PubMed ID = 23034647
Asano K, Yamasaki M, Takuno S, Miura K, Katagiri S, Ito T, Doi K, Wu J, Ebana K, Matsumoto T, Innan H, Kitano H, Ashikari M, Matsuoka M.
Proc Natl Acad Sci U S A  2011 108(27)   11034-9  
Artificial selection for a green revolution gene during japonica rice domestication.
[PubMed ID = 21646530
Mizuta Y, Harushima Y, Kurata N.
Proc Natl Acad Sci U S A  2010 107(47)   20417-22  
Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes.
[PubMed ID = 21048083
Yamaki S, Miyabayashi T, Eiguchi M, Kitano H, Nonomura K.I., Kurata N.
Breed Sci.  2010 60(5)   586-596  
Diversity of panicle branching patterns in wild relatives of rice.
Xu JH, Cheng C, Tsuchimoto S, Ohtsubo H, Ohtsubo E.
Genes Genet Syst  2007 82(3)   217-29  
Phylogenetic analysis of Oryza rufipogon strains and their relations to Oryza sativa strains by insertion polymorphism of rice SINEs.
[PubMed ID = 17660692
Nagano H, Onishi K, Ogasawara M, Horiuchi Y, Sano Y.
Genes Genet Syst  2005 80(5)   351-6  
Genealogy of the "Green Revolution" gene in rice.
[PubMed ID = 16394586
Xu JH, Osawa I, Tsuchimoto S, Ohtsubo E, Ohtsubo H.
Genes Genet Syst  2005 80(3)   161-71  
Two new SINE elements, p-SINE2 and p-SINE3, from rice.
[PubMed ID = 16172529
H. Morishima, Y. Sano, H.I. Oka
1979
Observations on wild and cultivated rices and companion weeds in the hilly areas of Nepal, India and Thailand. Report of study-tour in Tropical Asia, 1979
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