Strains - Wild Strains - Wild Core Collection - Detail

Detail of Wild Core Collection

Basic information
Acc. No. W0108
Core collection rank 3
Biological information
Species O. rufipogon
Old Species Name O. perennis
Genome AA
SINE code AA110000
Remarks Perennial
Evaluation of bacterial blight resistance reaction
( Results List )
bacterial leaf blight T7174(Reaction) HR
bacterial leaf blight T7133 (Reaction) MS
DNA Marker DNA Marker data
DRA Acc. No. -
Phenotype
Fiscal year 2000
History
Original place Cuttack, Orissa, India
Acquired from H.I. Oka
Year acquired(*Year registered) * 1958/4/1
Preservation
Preservation form SELFING,VEGETATIVELY
Seed stock volume less than 100
Year multiplied 1 1977
Year multiplied 2 1990
Reference    >> Please submit your publication.
Yin H, Akimoto M, Kaewcheenchai R, Sotowa M, Ishii T, Ishikawa R.
Genes Genet. Syst.  2015 90(5)   269-81  
Inconsistent diversities between nuclear and plastid genomes of AA genome species in the genus Oryza.
[PubMed ID = 26687860
Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B.
Nature  2012 490(7421)   497-501  
A map of rice genome variation reveals the origin of cultivated rice.
[PubMed ID = 23034647
Asano K, Yamasaki M, Takuno S, Miura K, Katagiri S, Ito T, Doi K, Wu J, Ebana K, Matsumoto T, Innan H, Kitano H, Ashikari M, Matsuoka M.
Proc. Natl. Acad. Sci. U.S.A.  2011 108(27)   11034-9  
Artificial selection for a green revolution gene during japonica rice domestication.
[PubMed ID = 21646530
Mizuta Y, Harushima Y, Kurata N.
Proc. Natl. Acad. Sci. U.S.A.  2010 107(47)   20417-22  
Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes.
[PubMed ID = 21048083
Tsuchimoto S, Hirao Y, Ohtsubo E, Ohtsubo H.
Genes Genet. Syst.  2008 83(3)   227-36  
New SINE families from rice, OsSN, with poly(A) at the 3' ends.
[PubMed ID = 18670134
Xu JH, Cheng C, Tsuchimoto S, Ohtsubo H, Ohtsubo E.
Genes Genet. Syst.  2007 82(3)   217-29  
Phylogenetic analysis of Oryza rufipogon strains and their relations to Oryza sativa strains by insertion polymorphism of rice SINEs.
[PubMed ID = 17660692
Miyashita NT, Yoshida K, Ishii T.
Genes Genet. Syst.  2005 80(3)   173-83  
DNA variation in the metallothionein genes in wild rice Oryza rufipogon: relationship between DNA sequence polymorphism, codon bias and gene expression.
[PubMed ID = 16172530
H.I. Oka
1957
Report of study-tour to India for collection of rice, 1957
Request
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