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Reference Detail
| Reference | ||
|---|---|---|
| Author | Arabia S., Sami A.A., Akhter S., Sarker R.H., Islam T. | |
| Title | Comprehensive <i>in silico</i> Characterization of Universal Stress Proteins in Rice (<i>Oryza sativa</i> L.) With Insight Into Their Stress-Specific Transcriptional Modulation. | |
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Abstract: In a world where climate change is real and its consequences are unprecedented, understanding of the plant adaptive capacity and native stress-responsive machinery is crucial. In recent years, universal stress proteins (USPs) have received much attention in the field of plant science due to their stress-specific transcriptional regulation. This study focuses on the extensive characterization of the <i>USP</i> gene family members in the monocot crop rice (<i>Oryza sativa</i> L. var. <i>japonica</i>). Here, we report a total of 44 <i>USP</i> genes in the rice genome. <i>In silico</i> characterization of these genes showed that domain architecture played a major role in the functional diversification of the <i>USP</i> gene family which holds for all plant <i>USPs</i>. On top of that, a higher conservation of <i>OsUSP</i> members has been exhibited with a monocot genome (<i>Zea mays</i> L.) as compared to a dicot genome (<i>Arabidopsis thaliana</i> L.). Expression profiling of the identified genes led to the discovery of multiple <i>OsUSP</i> genes that showed pronounced transcript alteration under various abiotic stress conditions, indicating their potential role as multi-functional stress-specific modules. Furthermore, expression validation of <i>OsUSP</i> genes using qRT-PCR provided a strong evidence for the utility <i>OsUSP</i> genes in building multi-stress tolerant plants. Altogether, this study provides leads to suitable <i>USP</i> candidates that could be targeted for plant breeding and genetic engineering experiments to develop stress resilient crop species. |
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| Journal | Front Plant Sci | |
| Country | Bangladesh | |
| Volume | 12 | |
| Pages | 712607 | |
| Year | 2021 | |
| PubMed ID | 34394169 | |
| PubMed Central ID | 8355530 | |
| DOI | 10.3389/fpls.2021.712607 | |
| URL | - | |
| Relation | ||
| Gene | RLCK105 RLCK122 RLCK194 RLCK201 RLCK207 RLCK249 RLCK280 RLCK281 RLCK285 RLCK307 RLCK315 RLCK361 RLCK362 RLCK39 RLCK61 RLCK68 RLCK69 RLCK87 USP1 USP1 USP11 USP12 USP13 USP14 USP17 USP18 USP19 USP2 USP21 USP22 USP24 USP25 USP26 USP3 USP30 USP36 USP37 USP42 USP43 USP44 USP5 USP6 USP7 USPA | |
| INSD | - | |
| Strain | Wild Core Collection | - |
| Induced Mutation Lines(NIG Collection) | - | |
| Sterile Seed Strain | - | |
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Lethal Embryo Mutantion Strain |
- | |
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Stages in Each Organ - Muant Lines (Gene) |
- | |
| Cultivated Varieties(NIG Collection) | - | |
| Stages in Each Organ | - | |
