Update info.Tools - Reference - Detail
Reference Detail
| Reference | ||
|---|---|---|
| Author | Li J., Zhang M., Sun J., Mao X., Wang J., Wang J., Liu H., Zheng H., Zhen Z., Zhao H., Zou D. | |
| Title | Genome-Wide Characterization and Identification of Trihelix Transcription Factor and Expression Profiling in Response to Abiotic Stresses in Rice (<i>Oryza sativa</i> L.). | |
|
Abstract: Trihelix transcription factors play a role in plant growth, development and various stress responses. Here, we identified 41 trihelix family genes in the rice genome. These <i>OsMSL</i>s (Myb/SANT-LIKE) were located on twelve chromosomes. Synteny analysis indicated only six duplicated gene pairs in the rice trihelix family. Phylogenetic analysis of these <i>OsMSL</i>s and the trihelix genes from other species divided them into five clusters. <i>OsMSL</i>s from different groups significantly diverged in terms of gene structure and conserved functional domains. However, all <i>OsMSL</i>s contained the same five <i>cis</i>-elements. Some of these were responsive to light and dehydration stress. All <i>OsMSL</i>s expressed in four tissues and six developmental stages of rice but with different expression patterns. Quantitative real-time PCR analysis revealed that the <i>OsMSL</i>s responded to abiotic stresses including drought and high salt stress and stress signal molecule including ABA (abscisic acid), hydrogen peroxide. <i>OsMSL39</i> were simultaneously expressed under all treatments, while <i>OsMSL28</i> showed high expression under hydrogen peroxide, drought, and high salt treatments. Moreover, <i>OsMSL16/27/33</i> displayed significant expression under ABA and drought treatments. Nevertheless, their responses were regulated by light. The expression levels of the 12 chosen <i>OsMSL</i>s differed between light and dark conditions. In conclusion, our results helped elucidate the biological functions of rice trihelix genes and provided a theoretical basis for further characterizing their biological roles in responding to abiotic stresses. |
||
| Journal | Int J Mol Sci | |
| Country | China | |
| Volume | 20(2) | |
| Pages | ||
| Year | 2019 | |
| PubMed ID | 30634597 | |
| PubMed Central ID | 6358761 | |
| DOI | 10.3390/ijms20020251 | |
| URL | - | |
| Relation | ||
| Gene | GRY79 MSL01 MSL02 MSL03 MSL04 MSL05 MSL06 MSL08 MSL09 MSL10 MSL11 MSL13 MSL14 MSL15 MSL16 MSL17 MSL18 MSL19 MSL20 MSL24 MSL25 MSL26 MSL27 MSL28 MSL29 MSL30 MSL31 MSL32 MSL33 MSL34 MSL35 MSL36 MSL37 MSL38 MSL39 MSL40 MSL41 MYB3R2 RML1 SH4 _ | |
| INSD | - | |
| Strain | Wild Core Collection | - |
| Induced Mutation Lines(NIG Collection) | - | |
| Sterile Seed Strain | - | |
|
Lethal Embryo Mutantion Strain |
- | |
|
Stages in Each Organ - Muant Lines (Gene) |
- | |
| Cultivated Varieties(NIG Collection) | - | |
| Stages in Each Organ | - | |
