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Reference Detail
| Reference | ||
|---|---|---|
| Author | Yanga W., Lub Z., Xionga Y., Yaoa J. | |
| Title | Genome-wide identification and co-expression network analysis of the OsNF-Y gene family in rice | |
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Abstract: Nuclear factor Y (NF-Y) is a ubiquitous transcription factor that regulates important physiological and developmental processes. In this study, we identified 34 OsNF-Y genes in rice, including 6 newly identified genes. Expression profile analysis covering the whole life cycle revealed that transcripts of OsNF-Y differentially accumulated in a tissue-specific, preferential or constitutive manner. In addition, gene duplication studies and expression analyses were performed to determine the evolutionary origins of the OsNF-Y gene family. Nine OsNF-Y genes were differentially expressed after treatment of seedlings with one or more abiotic stresses such as drought, salt and cold. Analysis of expression correlation and Gene Ontology annotation suggested that OsNF-Y genes were co-expressed with genes that participated in stress, accumulation of seed storage reserves, and plant development. Co-expression analysis also revealed that OsNF-Y genes might interact with each other, suggesting that NF-Y subunits formed complexes that take part in transcriptional regulation. These results provide useful information for further elucidating the function of the NF-Y family and their regulatory pathways. |
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| Journal | The Crop Journal | |
| Country | China | |
| Volume | 5(1) | |
| Pages | 21-31 | |
| Year | 2017 | |
| PubMed ID | - | |
| PubMed Central ID | - | |
| DOI | 10.1016/j.cj.2016.06.014 | |
| URL | - | |
| Relation | ||
| Gene | HAP2A HAP2B HAP2C HAP2D HAP2E HAP2F HAP2G HAP2H HAP2I HAP2J HAP2K HAP3A HAP3B HAP3C HAP3D HAP3F HAP3G HAP3I HAP3J HAP3K HAP5A HAP5B HAP5C HAP5D HAP5E HAP5F HAP5G HAP5H HAP5I HAP5J HAP5K HAP5L HD5 LEC1 | |
| INSD | - | |
| Strain | Wild Core Collection | - |
| Induced Mutation Lines(NIG Collection) | - | |
| Sterile Seed Strain | - | |
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Lethal Embryo Mutantion Strain |
- | |
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Stages in Each Organ - Muant Lines (Gene) |
- | |
| Cultivated Varieties(NIG Collection) | - | |
| Stages in Each Organ | - | |
