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Reference Detail
| Reference | ||
|---|---|---|
| Author | An, Gynheung | |
| Title | Identification of Active Transposon dTok, a Member of the hAT Family, in Rice. | |
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Abstract: Recent completion of the sequencing of the rice genome has revealed that it contains >40% repetitive sequences, most of which are related to inactive transposable elements. During the molecular analysis of the floral organ number 1/multiple pistil 2 (fon1/mp2) mutant, we identified an active transposable element dTok0 that was inserted at the kinase domain of FON1, a homolog of CLAVATA1. Insertion of the element into FON1 generated an 8 bp duplication of its target sites, which is one of the major characteristics of the hAT family of transposons. The dTok0 element was actively transposed out of the FON1 gene, leaving 5-8 bp footprints. Reinsertion into a new location was observed at a low frequency. Analysis of the genome sequence showed that the rice cultivar 'Nipponbare' contains 25 copies of dTok elements; similar numbers were present in all the Oryza species examined. Because dTok0 does not encode a transposase, enzyme activity should be provided in trans. We identified a putative autonomous transposon, Tok1 that contains an intact open reading frame of the Ac-like transposase. |
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| Journal | Plant Cell Physiol. | |
| Country | South Korea | |
| Volume | 47(11) | |
| Pages | 1473-1483 | |
| Year | 2006 | |
| PubMed ID | 16990289 | |
| PubMed Central ID | - | |
| DOI | 10.1093/pcp/pcl012 | |
| URL | - | |
| Relation | ||
| Gene | DTOK0 FON1 MP2 | |
| INSD | BK005879 BK005880 BK005881 BK005882 BK005883 BK005884 BK005885 BK005886 BK005887 BK005888 BK005889 BK005890 BK005891 BK005892 BK005893 BK005894 BK005895 BK005896 BK005897 BK005898 BK005899 BK005900 BK005901 DQ999005 BK005877 BK005878 | |
| Strain | Wild Core Collection | - |
| Induced Mutation Lines(NIG Collection) | - | |
| Sterile Seed Strain | - | |
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Lethal Embryo Mutantion Strain |
- | |
|
Stages in Each Organ - Muant Lines (Gene) |
- | |
| Cultivated Varieties(NIG Collection) | - | |
| Stages in Each Organ | - | |
