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Reference Detail
| Reference | ||
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| Author | Passardi,F., Longet,D., Penel,C. and Dunand,C. | |
| Title | The class III peroxidase multigenic family in rice and its evolution in land plants | |
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Abstract: Plant peroxidases (class III peroxidases, E.C. 1.11.1.7) are secreted glycoproteins known to be involved in the mechanism of cell elongation, in cell wall construction and differentiation, and in the defense against pathogens. They usually form large multigenic families in angiosperms. The recent completion of rice (Oryza sativa japonica c.v. Nipponbare) genome sequencing allowed drawing up the full inventory of the genes encoding class III peroxidases in this plant. We found 138 peroxidase genes distributed among the 12 rice chromosomes. In contrast to several other gene families studied so far, peroxidase genes are twice as numerous in rice as in Arabidopsis. This large number of genes results from various duplication events that were tentatively traced back using a phylogenetic tree based on the alignment of conserved amino acid sequences. We also searched for peroxidase encoding genes in the major phyla of plant kingdom. In addition to gymnosperms and angiosperms, sequences were found in liverworts, mosses and ferns, but not in unicellular green algae. Two rice and one Arabidopsis peroxidase genes appeared to be rather close to the only known sequence from the liverwort Marchantia polymorpha. The possible relationship of these peroxidases with the putative ancestor of peroxidase genes is discussed, as well as the connection between the development of the class III peroxidase multigenic family and the emergence of the first land plants. |
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| Journal | Phytochemistry | |
| Country | Switzerland | |
| Volume | 65(13) | |
| Pages | 1879-1893 | |
| Year | 2004 | |
| PubMed ID | 15279994 | |
| PubMed Central ID | - | |
| DOI | 10.1016/j.phytochem.2004.06.023 | |
| URL | - | |
| Relation | ||
| Gene | AM1 ATP6 POX1 POX22.3 POX3006 POX5.1 POX8.1 POXA POXGX9 POXN PRX102 PRX104 PRX105 PRX106 PRX108 PRX11 PRX115 PRX117 PRX121 PRX125 PRX128 PRX130 PRX132 PRX134 PRX135 PRX16 PRX17 PRX2 PRX20 PRX22 PRX24 PRX30 PRX32 PRX37 PRX39 PRX40 PRX45 PRX5 PRX55 PRX58 PRX62 PRX65 PRX70 PRX72 PRX77 PRX81 PRX82 PRX83 PRX86 PRX87 PRX88 PRX89 PRX92 PRX95 PRX96 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
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| Strain | Wild Core Collection | - |
| Induced Mutation Lines(NIG Collection) | - | |
| Sterile Seed Strain | - | |
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Lethal Embryo Mutantion Strain |
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Stages in Each Organ - Muant Lines (Gene) |
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| Cultivated Varieties(NIG Collection) | - | |
| Stages in Each Organ | - | |
