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Author Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Title Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
Abstract:
A large-scale sequence analysis of rice cDNA was performed for a library from rice callus cultured in a medium containing 1 p.p.m. of 2,4-dichlorophenoxyacetic acid. Random sequencing of 2778 cDNA clones generated 2259 non-redundant expressed sequence tags (ESTs). The strategy of sequencing cDNAs can yield quickly a large number of novel genes. After translation, 690 sequences showed a significant amino acid sequence similarity to sequences already known from PIR. The source of known proteins ranged from bacteria to human. In this report, the non-redundant set of 280 identified ESTs is analyzed in detail.
Journal Plant J.
Country Japan
Volume 6(4)
Pages 615-624
Year 1994
PubMed ID 7987417
PubMed Central ID -
DOI -
URL -
Relation
Gene 6PGDH2 ACP ACR5 ADH1 AGC17 AKR2 ALDC1 ALDC2 ANT APX7 ARF2B ARFA1A ARFA1D ARPK ASN BGL14X CALA CALB CC1 CCR10 CPD2B CRO1 CTHSP70-1 CYP20-2 DUF568.8 EEF1B EFTU EIF4A1 ENO2 ENOD93B FDB1 GAPC1 GAPC2 GDH1 GF14B GF14C GF14F GID2 GLN1;1 GLT1 GMPS1 GRP162 GRP3 GRP6 GS2 GSTF5 GSTU1 GSTU11 GSTU2 GSTU9 HMGB1 HMGB707 HMGB710 HSP60-3B Hb1 Hb2 IAA10 ISC23 LC4 LRT2 LTP1.15 MED37_1 MT2A MT2B NUO OLE18 ORYA P1 P2A P2C PCNA PDC1 PDIL1-1 PGI1 PGK2 PGK4 PHO1 PK1 PK3 PK5 RAB7B3 RACK1 RAN2 RFA2 RGP2 RLCK268 RPL17 RPL18A RPL19 RPL2 RPL23A RPL23E RPL31 RPL3A RPL5 RPS24 RPS25 RPS28 RPS3AC RPS5 RPS6A RPS6E RRJ2 SEC23C SODCC1 SODCC2 SPDS1 TPI TRXH TUBA3 UBL40-1 UBL40-2 UBL40-4 UBQ5 UGP1 VALRS1 XTH11 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
INSD U55873 D83378 AB117751 AB024962
Strain Wild Core Collection -
Induced Mutation Lines(NIG Collection) -
Sterile Seed Strain -
Lethal Embryo
Mutantion Strain
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Stages in Each Organ
- Muant Lines (Gene)
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Cultivated Varieties(NIG Collection) -
Stages in Each Organ -
/rice/oryzabase