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Author Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Title Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
Abstract:
A large-scale sequence analysis of rice cDNA was performed for a library from rice callus cultured in a medium containing 1 p.p.m. of 2,4-dichlorophenoxyacetic acid. Random sequencing of 2778 cDNA clones generated 2259 non-redundant expressed sequence tags (ESTs). The strategy of sequencing cDNAs can yield quickly a large number of novel genes. After translation, 690 sequences showed a significant amino acid sequence similarity to sequences already known from PIR. The source of known proteins ranged from bacteria to human. In this report, the non-redundant set of 280 identified ESTs is analyzed in detail.
Journal Plant J.
Country Japan
Volume 6(4)
Pages 615-624
Year 1994
PubMed ID 7987417
PubMed Central ID -
DOI -
URL -
Relation
Gene ACR5 ADH1 AKR2 ALDC1 ANT APX7 ASN CALA CALB CC1 CCR10 CPD2B CTHSP70-1 CYP20-2 EEF1B EFTU EIF4A1 ENOD93B GDH1 GF14B GF14C GF14F GID2 GLN1;1 GLT1 GMPS1 GRP3 GRP6 GS2 GSTF5 GSTU1 GSTU11 GSTU2 GSTU9 Hb1 Hb2 IAA10 ISC23 LRT2 MT2A MT2B OCP PCNA PDC1 PGI1 PGK2 PGK4 RACK1 RFA2 RGP2 RLCK268 RPL17 RPL19 RPL2 RPL31 RPL3A RPL5 RPS24 RPS25 RPS28 RPS5 SODCC1 SODCC2 SPDS1 TPI TRXH TUBA3 UBL40-2 UBQ5 UGP1 VALRS1 XTH11 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
INSD D83378 AB117751 AB024962 U55873
Strain Wild Core Collection -
Induced Mutation Lines(NIG Collection) -
Sterile Seed Strain -
Lethal Embryo
Mutantion Strain
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Stages in Each Organ
- Muant Lines (Gene)
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Cultivated Varieties(NIG Collection) -
Stages in Each Organ -
/rice/oryzabase