Genome/Dev. - Stages in Each Organ - Expressed Gene

List of Expressed Gene in Each Organs

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Expressed Gene Stages in Each Organ References
AID1 anther ( Formation of binucleated gametophyte ) [2004 Plant Physiol.]  The ANTHER INDEHISCENCE1 gene encoding a single MYB domain protein is involved in anther development in rice.
AMY1A embryo ( First leaf formation )
CP1 anther ( Formation of binucleated gametophyte ) [2004 Plant Mol. Biol.]  Isolation and characterization of a rice cysteine protease gene, OsCP1, using T-DNA gene-trap system.
DL leaf ( Formation of leaf primordium )
leaf ( Hood-shape primordium )
leaf ( Rapid elongation of leaf blade )
leaf ( Formation of ligule primordium )
spikelet ( Formation of carpel primordium )
[2004 Plant Cell]  The YABBY Gene DROOPING LEAF Regulates Carpel Specification and Midrib Development in Oryza sativa.
[2003 Development]  SUPERWOMAN1 and DROOPING LEAF genes control floral organ identity in rice.
EM embryo ( Enlargement of organs ) [2002 Plant Cell Physiol.]  Temporal and spatial expression pattern of the OSVP1 and OSEM genes during seed development in rice.
FZP spikelet ( Formation of a pair of rudimentary glume primordia ) [2003 Development]  FRIZZY PANICLE is required to prevent the formation of axillary meristems and to establish floral meristem identity in rice spikelets.
LHS1 spikelet ( Formation of lemma primordium )
spikelet ( Formation of palea primordium )
[2000 Plant Cell]  leafy hull sterile1 is a homeotic mutation in a rice MADS box gene affecting rice flower development.
[2003 Development]  FRIZZY PANICLE is required to prevent the formation of axillary meristems and to establish floral meristem identity in rice spikelets.
MADS13 spikelet ( Formation of ovule and pollens )
ovule ( Ovule primordium differentiation )
[1999 Dev Genet.]  OsMADS13, a novel rice MADS-box gene expressed during ovule development.
MADS2 spikelet ( Formation of stamen primordia )
spikelet ( Formation of lodicule primordia )
[2000 Plant Cell Physiol.]  Spatially and temporally regulated expression of rice MADS bos genes with similarity to Arabidopsis class A, B, C genes
MADS7 spikelet ( Formation of lodicule primordia )
spikelet ( Formation of carpel primordium )
spikelet ( Formation of stamen primordia )
spikelet ( Formation of ovule and pollens )
[1997 Mol. Gen. Genet.]  MADS box genes expressed in developing inflorescences of rice and sorghum.
MSP1 spikelet ( Formation of ovule and pollens )
ovule ( Division of integument primordium )
anther ( Formation of anther wall layer )
[2003 Plant Cell]  The MSP1 Gene Is Necessary to Restrict the Number of Cells Entering into Male and Female Sporogenesis and to Initiate Anther Wall Formation in Rice.
OSBZ8 embryo ( Globular stage III ) [1999 Plant Cell Physiol.]  Differential in situ expression of three ABA-responsive genes of rice, Rab16A, REG2 and OSBZ8 during seed development.
OSC4 anther ( Formation of uninucleated gametophyte ) [1994 Plant Mol. Biol.]  Molecular characterization of rice genes specifically expressed in the anther tapetum.
OSC6 anther ( Formation of uninucleated gametophyte ) [1994 Plant Mol. Biol.]  Molecular characterization of rice genes specifically expressed in the anther tapetum.
OSH1 embryo ( Globular stage III )
leaf ( Formation of leaf founder cells )
[1996 Proc. Natl. Acad. Sci. U.S.A.]  A rice homeobox gene, OSH1, is expressd before organ differentiation in a specific region during early embryogenesis.
PAIR1 pollen mother cell ( Pre-meiotic S/G2 ) [2004 Plant Cell]  The Novel Gene HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1 of Rice Encodes a Putative Coiled-Coil Protein Required for Homologous Chromosome Pairing in Meiosis.
PAIR2 pollen mother cell ( Pre-meiotic S/G2 ) [2004 Molecular Genetics & Genomics (Molecular General Genetics up to 2001)]  An insertional mutation in the rice PAIR2 gene, the ortholog of Arabidopsis ASY1, results in a defect in homologous chromosome pairing during meiosis.
PNH1 leaf ( Formation of leaf founder cells )
leaf ( Formation of ligule primordium )
leaf ( Hood-shape primordium )
leaf ( Formation of leaf primordium )
leaf ( Rapid elongation of leaf blade )
[2002 Plant J.]  OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice.
QHB Crown root ( Establishment of initial cells )
Crown root ( Establishment of fundamental organization )
Crown root ( Onset of cell elongation and vacuolation )
Crown root ( Emergence of crown root )
Crown root ( Differentiation of cortex )
Crown root ( Differentiation of epidermis and endodermis )
Crown root ( Establishment of epidermis-endodermis, central cylinder and root cap initials )
[2003 Plant J.]  Isolation and characterization of a rice WUSCHEL-type homeobox gene that is specefically expressed in the central cells of a quiescent center in the root apical meristem.
RAB16A embryo ( Enlargement of organs ) [1999 Plant Cell Physiol.]  Differential in situ expression of three ABA-responsive genes of rice, Rab16A, REG2 and OSBZ8 during seed development.
RAG spikelet ( Formation of stamen primordia )
spikelet ( Formation of carpel primordium )
[2000 Plant Cell Physiol.]  Spatially and temporally regulated expression of rice MADS bos genes with similarity to Arabidopsis class A, B, C genes
RAP1A spikelet ( Formation of lemma primordium )
spikelet ( Formation of lodicule primordia )
spikelet ( Formation of palea primordium )
[2000 Plant Cell Physiol.]  Spatially and temporally regulated expression of rice MADS bos genes with similarity to Arabidopsis class A, B, C genes
REG2 embryo ( Enlargement of organs ) [1999 Plant Cell Physiol.]  Differential in situ expression of three ABA-responsive genes of rice, Rab16A, REG2 and OSBZ8 during seed development.
RF1 anther ( Formation of binucleated gametophyte ) [2004 Plant J.]  Map-based cloning of a fertility restorer gene, Rf-1, in rice (Oryza sativa L.).
[2003 FEBS Lett.]  A pentatricopeptide repeat-containing gene that promotes the processing of aberrant atp6 RNA of cytoplasmic male-sterile rice.
SCR leaf ( Formation of ligule primordium )
leaf ( Formation of leaf primordium )
leaf ( Hood-shape primordium )
leaf ( Rapid elongation of leaf blade )
Crown root ( Onset of cell elongation and vacuolation )
Crown root ( Establishment of epidermis-endodermis, central cylinder and root cap initials )
Crown root ( Differentiation of epidermis and endodermis )
Crown root ( Establishment of fundamental organization )
Crown root ( Establishment of initial cells )
Crown root ( Differentiation of cortex )
Crown root ( Emergence of crown root )
[2003 Plant J.]  The SCARECROW gene's role in asymmetric cell divisions in rice plants.
SPW1 spikelet ( Formation of lodicule primordia )
spikelet ( Formation of stamen primordia )
ovule ( Division of integument primordium )
[2003 Development]  SUPERWOMAN1 and DROOPING LEAF genes control floral organ identity in rice.
VP1 embryo ( Globular stage III )
embryo ( Enlargement of organs )
[2002 Plant Cell Physiol.]  Temporal and spatial expression pattern of the OSVP1 and OSEM genes during seed development in rice.
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