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Basic Information
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CGSNL Gene Symbol
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ETT1
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Gene Symbol Synonym
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OsARF15, ARF15, OsETT1, ARF3b, OsARF3b, OsARF3-1, ARF3-1, OsARF3, ARF3, DLN154, OsDLN154
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CGSNL Gene Name
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ETTIN 1
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Gene Name Synonym
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auxin response factor-15, auxin response factor 15, OsETTIN1, ETTIN1, DLN repressor 154, DLN motif protein 154
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Protein Name
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ETTIN 1
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Allele
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ARF3bmut, arf15-1, arf15-2, arf15-3, arf15-4, arf15-5, arf15-6, osarf3b
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Chromosome No.
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5
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Explanation
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a rice ortholog of Arabidopsis ETTIN. AB071290, Q8S985. ARF3b in Song et al. 2012. OsARF3 and OsARF3-1 in Lu et al. 2018. miR390's target (Lu et al. 2018). TO:0001066: number of metaxylem vessels. TO:0000985: root system morphology trait. GO:1900150: regulation of defense response to fungus. GO:1900426: positive regulation of defense response to bacterium. GO:2000377: regulation of reactive oxygen species metabolic process. PO:0030123: panicle inflorescence.
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Trait Class
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Tolerance and resistance - Disease resistance
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
Vegetative organ - Leaf
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK099793
AK062170
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MSU ID
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LOC_Os05g48870.1
LOC_Os05g48870.5
LOC_Os05g48870.6
LOC_Os05g48870.7
LOC_Os05g48870.8
LOC_Os05g48870.9
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RAP ID
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Os05g0563400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Gu X., Si F., Feng Z., Li S., Liang D., Yang P., Yang C., Yan B., Tang J., Yang Y., Li T., Li L., Zhou J., Li J., Feng L., Liu J.Y., Yang Y., Deng Y., Wu X.N., Zhao Z., Wan J., Cao X., Song X., He Z., Liu J.
Nat Commun 2023 14(1) 4441
The OsSGS3-tasiRNA-OsARF3 module orchestrates abiotic-biotic stress response trade-off in rice.
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Wang B., Wang Y., Yu W., Wang L., Lan Q., Wang Y., Chen C., Zhang Y.
Biology (Basel) 2022 11(12)
Knocking Out the Transcription Factor OsNAC092 Promoted Rice drought tolerance.
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Li H., You C., Yoshikawa M., Yang X., Gu H., Li C., Cui J., Chen X., Ye N., Zhang J., Wang G.
Cell Res. 2022 32(10) 931-945
A spontaneous thermo-sensitive female sterility mutation in rice enables fully mechanized hybrid breeding.
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Reeger J.E., Wheatley M., Yang Y., Brown K.M.
Plant Direct 2021 5(6) e00328
Targeted mutation of transcription factor genes alters metaxylem vessel size and number in rice roots.
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Xu M., Tang D., Cheng X., Zhang J., Tang Y., Tao Q., Shi W., You A., Gu M., Cheng Z., Yu H.
Plant Physiol. 2019 180(2) 952-965
OsPINOID Regulates Stigma and Ovule Initiation through Maintenance of the floral meristem by Auxin Signaling.
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Li Y., Yang Y., Liu Y., Li D., Zhao Y., Li Z., Liu Y., Jiang D., Li J., Zhou H., Chen J., Zhuang C., Liu Z.
Rice (N Y) 2019 12(1) 60
Overexpression of OsAGO1b Induces Adaxially Rolled Leaves by Affecting Leaf Abaxial Sclerenchymatous Cell Development in Rice.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7)
Analysis of Rice Proteins with DLN repressor Motif/S.
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Lu Y., Feng Z., Liu X., Bian L., Xie H., Zhang C., Mysore K.S., Liang J.
BMC Plant Biol. 2018 18(1) 261
MiR393 and miR390 synergistically regulate lateral root growth in rice under different conditions.
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Zhang N., Yu H., Yu H., Cai Y., Huang L., Xu C., Xiong G., Meng X., Wang J., Chen H., Liu G., Jing Y., Yuan Y., Liang Y., Li S., Smith S.M., Li J., Wang Y.
Plant Cell 2018 30(7) 1461-1475
A Core Regulatory Pathway Controlling Rice tiller angle Mediated by the <i>LAZY1</i>-Dependent Asymmetric Distribution of Auxin.
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Toriba T.a b, Hirano H.Y.a
Plant Journal 2014 77 616-626
The DROOPING LEAF and OsETTIN2 genes promote awn development in rice
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Zhao F.Y.a, Han M.M.a, Zhang S.Y.b, Ren J.a, Hu F.a, Wang X.a
Russian Journal of Plant Physiology 2014 61 608-618
MAPKs as a cross point in H2O2 and auxin signaling under combined cadmium and zinc stress in rice roots
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Khanday I., Yadav S.R., Vijayraghavan U.
Plant Physiol. 2013 161(4) 1970-83
Rice LHS1/OsMADS1 Controls Floret Meristem Specification by Coordinated Regulation of Transcription Factors and Hormone Signaling Pathways.
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Song X., Wang D., Ma L., Chen Z., Li P., Cui X., Liu C., Cao S., Chu C., Tao Y., Cao X.
Plant J. 2012 71(3) 378-89
Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.
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Toriba T., Suzaki T., Yamaguchi T., Ohmori Y., Tsukaya H., Hiro-Yuki Hirano
Plant Cell 2010 22(5) 1452-62
Distinct regulation of adaxial-abaxial polarity in anther patterning in rice.
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Wang D., Pei K., Fu Y., Sun Z., Li S., Liu H., Tang K., Han B., Tao Y.
Gene 2007 394(1-2) 13-24
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).
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Y Sato, A Nishimura, M Ito, M Ashikari, H Y Hirano, M Matsuoka
Genes Genet. Syst. 2001 76(6) 373-80
Auxin response factor family in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to temperature stimulus( GO:0009266 )
response to heat( GO:0009408 )
defense response to bacterium( GO:0042742 )
defense response to fungus( GO:0050832 )
metaxylem development( GO:0090058 )
DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
auxin mediated signaling pathway( GO:0009734 )
response to gravity( GO:0009629 )
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Trait Ontology
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leaf width( TO:0000370 )
leaf shape( TO:0000492 )
lemma shape( TO:0000614 )
gravity response trait( TO:0002693 )
vascular tissue related trait( TO:0000470 )
blast disease( TO:0000074 )
bacterial blight disease resistance( TO:0000175 )
heat tolerance( TO:0000259 )
hydrogen peroxide content( TO:0000605 )
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Plant Ontology
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leaf( PO:0025034 )
seed( PO:0009010 )
inflorescence( PO:0009049 )
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Related Strains
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Phenotype images
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Last updated
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Feb 21, 2026
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Update info.